| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1520 |
|---|
| Symbol | |
|---|
| ID | 5588081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 1503511 |
|---|
| End bp | 1504803 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640925212 |
|---|
| Product | putative sugar ABC transporter, periplasmic sugar-binding protein |
|---|
| Protein accession | YP_001462617 |
|---|
| Protein GI | 157156291 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT CAAAAATCGT GCTGTTATCA GCACTGGTTT CCTGCGCCCT GATTTCAGGC
TGTAAAGAAG AAAATAAAAC GAATGTATCC ATCGAATTTA TGCATTCTTC GGTGGAGCAG
GAGCGCCAGG CCGTTATCAG TAAATTGATT GCCCGTTTTG AAAAAGAAAA CCCTGGCATC
ACCGTTAAGC AAGTGCCCGT GGAAGAAGAT GCCTATAACA CTAAAGTCAT TACTCTTTCA
CGTAGCGGTT CGCTGCCGGA AGTGATCGAA ACCAGCCATG ACTACGCCAA AGTGATGGAC
AAAGAGCAGC TTATTGATCG CAAAGCGGTT GCCACAGTCA TCAGCAACGT TGGTGAAGGC
GCGTTTTACG ATGGCGTACT GCGTATTGTG CGTACCGAAG ATGGTAGCGC ATGGACCGGT
GTTCCTGTCA GCGCCTGGAT TGGCGGTATC TGGTATCGCA AAGATGTGCT GGCAAAAGCG
GGGCTTGAGG AGCCGAAAAA CTGGCAACAG CTGCTGGACG TTGCACAGAA ACTGAATGAC
CCGGCGAATA AAAAATACGG CATTGCGCTG CCTACAGCAG AAAGCGTGTT GACGGAACAA
TCCTTCTCCC AGTTTGCGTT ATCCAACCAG GCTAACGTCT TTAACGCCGA AGGCAACATC
ACCCTTGATA CACCAGAGAT GATGCAGGCA CTGACCTATT ACCGCGACCT TGCTGCCAAC
ACTATGCCGG GTTCTAACGA CATCATGGAA GTGAAAGACG CCTTTATGAA CGGCACCGCG
CCGATGGCGA TTTACTCCAC CTATATCCTT CCGGCTGTGA TTAAAGAAGG CGACCCGAAA
AACGTCGGTT TCGTGGTGCC AACCGAGAAA AACTCTGCGG TCTACGGCAT GTTGACCTCG
CTGACCATTA CCGCCGGGCA AAAGACCGAA GAGACGGAAG CAGCTGAAAA ATTTGTCACC
TTTATGGAGC AGGCAGACAA CATTGCCGAC TGGGTGATGA TGTCGCCAGG TGCTGCGCTG
CCGGTGAATA AAGCGGTTGT CACTACCGCC ACCTGGAAAG ACAACGACGT TATTAAGGCG
CTGGGTGAAC TACCGAATCA GCTAATCGGT GAACTGCCAA ATATTCAGGT CTTTGGTGCA
GTAGGGGATA AAAACTTTAC CCGCATGGGT GATGTGACGG GTTCTGGCGT GGTGAGCTCC
ATGGTGCATA ACGTCACCGT GGGTAAAGCC GATCTCCCTG GCACGCTGCA AGCGAGCCAG
AAAAAGCTGG ATGAACTGAT CGAACAGCAC TAA
|
|---|
| Protein sequence | MIKSKIVLLS ALVSCALISG CKEENKTNVS IEFMHSSVEQ ERQAVISKLI ARFEKENPGI
TVKQVPVEED AYNTKVITLS RSGSLPEVIE TSHDYAKVMD KEQLIDRKAV ATVISNVGEG
AFYDGVLRIV RTEDGSAWTG VPVSAWIGGI WYRKDVLAKA GLEEPKNWQQ LLDVAQKLND
PANKKYGIAL PTAESVLTEQ SFSQFALSNQ ANVFNAEGNI TLDTPEMMQA LTYYRDLAAN
TMPGSNDIME VKDAFMNGTA PMAIYSTYIL PAVIKEGDPK NVGFVVPTEK NSAVYGMLTS
LTITAGQKTE ETEAAEKFVT FMEQADNIAD WVMMSPGAAL PVNKAVVTTA TWKDNDVIKA
LGELPNQLIG ELPNIQVFGA VGDKNFTRMG DVTGSGVVSS MVHNVTVGKA DLPGTLQASQ
KKLDELIEQH
|
|---|
| |