Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1467 |
Symbol | rluB |
ID | 5586238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1458584 |
End bp | 1459456 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640925160 |
Product | 23S rRNA pseudouridylate synthase B |
Protein accession | YP_001462565 |
Protein GI | 157154729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA AATTACAGAA AGTGCTGGCC CGCGCTGGCC ACGGCTCCCG CCGTGAAATC GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT CGCGTTGAAG TTACCCCTGG GCTGAAAATT CGTATCGATG GTCATCTGAT TTCGGTACGT GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTACA AACCGGAAGG TGAGTTGTGT ACCCGTAACG ATCCGGAAGG GCGTCCGACG GTGTTTGACC GTCTGCCAAA GCTGCGTGGC GCACGCTGGA TTGCCGTAGG TCGTCTGGAC GTTAACACCT GTGGTCTGCT GCTGTTCACC ACCGATGGTG AACTGGCAAA CCGTTTAATG CATCCAAGCC GTGAAGTTGA ACGTGAATAC GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTGAG TCGTGGCGTG CAACTGGAAG ATGGTCCGGC AGCTTTTAAA ACCATCAAGT TCAGCGGCGG CGAAGGGATC AACCAGTGGT ACAACGTGAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTGTGG GAAGCGGTTG GTGTGCAGGT GAGCCGCCTG ATCCGTGTTC GTTACGGTGA TATCCCACTG CCAAAAGGTC TGCCACGCGG TGGCTGGACG GAGCTGGACC TCGCCCAGAC TAACTATCTG CGCGAACTGG TGGAGCTACC GCCAGAAACC AGCTCTAAAG TCGCTGTAGA AAAAGACCGT CGTCGCATGA AGGCGAATCA GATTCGTCGT GCGGTGAAAC GTCACAGTCA GGTGAGCGGC GGTCGTCGTT CTGGCGGGCG TAATAACGGT TAA
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Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK TIKFSGGEGI NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNG
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