Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1374 |
Symbol | narK |
ID | 5587489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1368196 |
End bp | 1369581 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640925070 |
Product | nitrite extrusion protein 1 |
Protein accession | YP_001462479 |
Protein GI | 157157386 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0787741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCACT CATCCGCCCC CGAAAGGGCT ACTGGAGCTG TCATTACAGA TTGGCGACCG GAAGATCCTG CGTTCTGGCA ACAACGCGGT CAACGTATTG CCAGCCGCAA CCTGTGGATT TCCGTTCCCT GTCTGCTGCT GGCGTTTTGC GTATGGATGT TGTTCAGCGC TGTTGCGGTG AACCTACCGA AAGTCGGCTT TAATTTTACG ACCGATCAGC TATTTATGTT GACTGCGCTG CCTTCGGTTT CTGGCGCGTT ATTACGTGTT CCATACTCCT TTATGGTTCC TATCTTCGGT GGTCGTCGCT GGACGGCGTT CAGCACCGGT ATTCTGATTA TTCCTTGCGT CTGGCTGGGT TTTGCCGTGC AGGATACCTC CACGCCTTAT AGCGTCTTCA TCATCATCTC TCTGCTATGC GGCTTTGCTG GCGCGAACTT CGCCTCCAGT ATGGCAAACA TCAGCTTCTT CTTTCCGAAA CAGAAGCAGG GTGGCGCGCT GGGTCTGAAT GGTGGTCTGG GCAACATGGG CGTCAGCGTC ATGCAGTTGG TTGCTCCGCT GGTGGTATCA CTGTCGATTT TCGCAGTATT TGGTAGCCAG GGCGTCAAAC AGCCGGATGG GACTGAGCTG TATCTGGCGA ATGCGTCCTG GATATGGGTG CCGTTCCTTG CCATCTTCAC TATTGCGGCG TGGTTTGGCA TGAACGATCT TGCTACCTCG AAAGCCTCCA TCAAGGAGCA GTTGCCGGTA CTCAAACGGG GTCATCTGTG GATTATGAGC CTGCTGTATC TGGCAACCTT CGGCTCCTTC ATCGGCTTCT CCGCGGGCTT TGCAATGCTG TCAAAAACGC AGTTCCCGGA TGTTCAGATT CTGCAATACG CTTTCTTCGG GCCGTTTATT GGTGCGCTGG CGCGTTCTGC AGGTGGTGCA TTATCTGACC GTCTGGGCGG AACTCGTGTC ACGCTGGTGA ACTTTATTCT GATGGCGATT TTCAGCGGCC TGCTGTTCCT GACCTTACCT ACTGACGGGC AGGGCGGAAG CTTCATGGCG TTCTTCGCGG TCTTCCTGGC GCTGTTCCTG ACAGCTGGGC TGGGTAGTGG TTCCACTTTC CAGATGATTT CAGTGATCTT CCGTAAACTG ACAATGGATC GCGTGAAAGC AGAAGGGGGT TCTGACGAAC GTGCGATGCG TGAAGCGGCA ACCGACACGG CGGCGGCGTT GGGTTTCATC TCTGCGATTG GCGCGATAGG TGGCTTCTTT ATCCCGAAAG CGTTCGGTAG CTCGCTGGCA TTAACGGGTT CGCCAGTTGG CGCAATGAAA GTATTTTTGA TTTTCTATAT CGCCTGCGTA GTGATTACCT GGGCGGTATA TGGTCGGCAT TCCTAA
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Protein sequence | MSHSSAPERA TGAVITDWRP EDPAFWQQRG QRIASRNLWI SVPCLLLAFC VWMLFSAVAV NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPIFG GRRWTAFSTG ILIIPCVWLG FAVQDTSTPY SVFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV MQLVAPLVVS LSIFAVFGSQ GVKQPDGTEL YLANASWIWV PFLAIFTIAA WFGMNDLATS KASIKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LQYAFFGPFI GALARSAGGA LSDRLGGTRV TLVNFILMAI FSGLLFLTLP TDGQGGSFMA FFAVFLALFL TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SDERAMREAA TDTAAALGFI SAIGAIGGFF IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH S
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