Gene EcE24377A_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0951 
SymbolmacA 
ID5588375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp968587 
End bp969702 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content53% 
IMG OID640924661 
Productmacrolide transporter subunit MacA 
Protein accessionYP_001462076 
Protein GI157157920 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0557503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC 
GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTGC CGACTTATCA GACACTGATT
GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT
AAGGTTGACG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CTCTGTCGGT GGCGATTGGC
GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTTATTGATC CTGAACAGGC TGAAAACCAG
ATTAAGGAGG TCGAAGCAAC GCTGATGGAG CTACGTGCGC AGCGGCAGCA GGCGGAAGCG
GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTGGCACA AACGCAGGCG
GTTTCACAGC AGGATCTCGA CACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT
GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCCTCTC TCGATACGGC TAAAACCAAT
CTCGATTACA CTCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG
CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG
AGCACCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG
CAAAAAGCCT GGTTTACGGT ACTTGGCGAT CCACTGACGC GCTACGAGGG GCAAATCAAG
GATGTACTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA
GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACTG CGCAAGTGCA TATTCAGCTC
ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTCGGCGT TAGGCGATCC GGTTGGCGAT
AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT
GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TTGAAGCGGG CGATGAAGTG
GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
 
Protein sequence
MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR 
KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA
ELKLARVTYS RQQRLAQTQA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN
LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM STMLVKAQVS EADVIHLKPG
QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL
TDVKNVLTIP LSALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV
VIGEAKPGAA Q