| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0931 |
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| Symbol | rumB |
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| ID | 5587143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 947932 |
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| End bp | 949059 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640924641 |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_001462056 |
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| Protein GI | 157156456 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTGCG CACTTTACGA CGCGGGTCGC TGTCGTTCCT GTCAGTGGAT AACGCAGCCG
ATTCCAGAGC AACTCTCCGC TAAAACCGCC GATCTTAAAA ATCTGCTCGC CGATTTTCCG
GTTGAGGAAT GGTGCGCGCC GGTGTCAGGC CCGGAACAAG GGTTTCGTAA TAAAGCCAAA
ATGGTGGTGA GTGGTAGCGT TGAAAAACCA CTGCTCGGTA TGCTGCATCG CGACGGCACA
CCAGAAGACC TTTGTGACTG CCCGCTTTAT CCTGCCTCAT TTGCGCCCGT TTTTGCGGCG
CTAAAACCGT TTATCGCCCG TGCGGGGCTG ACACCCTACA ACGTGGCGCG TAAGCGTGGC
GAACTGAAAT ACATTCTGCT GACTGAAAGC CAGAGCGATG GCGGCATGAT GCTGCGCTTT
GTACTGCGTT CTGAAACCAA ACTGGCACAA CTGCGTAAGG CGCTGCCGTG GTTACAGGAA
CAACTACCGC AACTGAAAGT TATTACCGTC AATATTCAGC CGGTACATAT GGCGATTATG
GAAGGGGAGA CGGAGATCTA CCTTACTGAA CAACAGGCGC TGGCAGAGCG TTTTAATGAC
GTACCGCTGT GGATCCGTCC GCAAAGTTTC TTCCAGACTA ATCCGGCGGT CGCCAGCCAG
CTGTACGCTA CCGCGCGCGA CTGGGTACGG CAGCTGCCAG TTAAACATAT GTGGGATCTG
TTCTGCGGTG TGGGTGGCTT TGGTTTACAC TGCGCGACGC CTGACATGCA GTTAACCGGG
ATCGAAATTG CATCAGAGGC CATTGCCTGT GCAAAGCAGT CAGCCGCTGA ACTGGGCTTA
ACGCGTTTGC AATTTCAGGC GCTGGACTCC ACTCAGTTTG CCACCGCTCA GGGGGAGGTG
CCGGAGCTGG TGCTGGTTAA TCCGCCGCGC CGCGGCATTG GTAAACCGCT ATGTGATTAT
CTCTCAACAA TGGCACCGCG TTTTATTATC TACTCCAGCT GTAACGCCCA AACCATGGCG
AAAGATATCC GCGAACTGCC AGGTTACCGC ATCGAACGGG TACAGCTTTT TGATATGTTC
CCGCACACCG CGCACTATGA AGTGCTGACG CTGCTGGTGA AGCAATAA
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| Protein sequence | MQCALYDAGR CRSCQWITQP IPEQLSAKTA DLKNLLADFP VEEWCAPVSG PEQGFRNKAK
MVVSGSVEKP LLGMLHRDGT PEDLCDCPLY PASFAPVFAA LKPFIARAGL TPYNVARKRG
ELKYILLTES QSDGGMMLRF VLRSETKLAQ LRKALPWLQE QLPQLKVITV NIQPVHMAIM
EGETEIYLTE QQALAERFND VPLWIRPQSF FQTNPAVASQ LYATARDWVR QLPVKHMWDL
FCGVGGFGLH CATPDMQLTG IEIASEAIAC AKQSAAELGL TRLQFQALDS TQFATAQGEV
PELVLVNPPR RGIGKPLCDY LSTMAPRFII YSSCNAQTMA KDIRELPGYR IERVQLFDMF
PHTAHYEVLT LLVKQ
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