Gene EcE24377A_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0860 
Symbol 
ID5588954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp877151 
End bp878146 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content57% 
IMG OID640924570 
Producthypothetical protein 
Protein accessionYP_001461985 
Protein GI157159083 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC CTGTCGTGAT CGGATTGGCG GTAGTGGTAC TTGCCGCCGT GGTTGCCGGA 
GGCTACTGGT GGTATCAAAG CCGCCAGGAT AACGGCCTGA CGCTGTATGG CAACGTGGAT
ATTCGTACGG TAAATCTTAG TTTCCGTGTT GGGGGGCGCG TTGAATCGCT GGCGGTGGAC
GAAGGTGATG CGATCAAAGC GGGCCAGGTG CTGGGCGAAC TGGATCACAA GCCGTATGAG
ATTGCCCTGA TGCAGGCGAA AGCGGGCGTC TCGGTGGCAC AGGCGCAGTA TGATCTGATG
CTTGCCGGGT ATCGCGATGA AGAAATCGCT CAGGCCGCCG CAGCGGTGAA ACAGGCTCAA
GCCGCCTATG ACTATGCGCA GAACTTCTAT AACCGCCAGC AAGGACTGTG GAAAAGCCGC
ACCATTTCGG CAAATGACCT GGAAAATGCC CGCTCCTCGC GCGACCAGGC ACAGGCAACG
CTGAAATCAG CACAGGATAA ATTGCGTCAG TACCGTTCCG GTAACCGTGA ACAGGACATC
GCTCAGGCGA AAGCCAGCCT CGAACAGGCG CAGGCGCAAC TGGCGCAGGC GGAGCTGAAT
TTACAGGACT CAACGTTGAT AGCACCGTCT GATGGCACGC TGTTAACGCG CGCGGTGGAG
CCAGGCACGG TTCTCAATGA AGGTGGCACG GTGTTTACCG TTTCACTAAC GCGTCCGGTG
TGGGTACGTG CCTATGTTGA TGAACGGAAT CTTGACCAGG CCCAGCCGGG GCGCAAAGTG
CTGCTTTATA CCGATGGTCG CCCGGACAAG CCCTATCACG GACAGATTGG TTTCGTTTCG
CCGACTGCTG AATTTACCCC GAAAACCGTC GAAACACCGG ATCTGCGTAC CGACCTCGTC
TATCGCCTGC GTATTGTGGT GACCGACGCC GATGATGCGT TACGCCAGGG AATGCCGGTG
ACGGTGCAAT TCGGTAACGA GGCAGGACAT GAATGA
 
Protein sequence
MKKPVVIGLA VVVLAAVVAG GYWWYQSRQD NGLTLYGNVD IRTVNLSFRV GGRVESLAVD 
EGDAIKAGQV LGELDHKPYE IALMQAKAGV SVAQAQYDLM LAGYRDEEIA QAAAAVKQAQ
AAYDYAQNFY NRQQGLWKSR TISANDLENA RSSRDQAQAT LKSAQDKLRQ YRSGNREQDI
AQAKASLEQA QAQLAQAELN LQDSTLIAPS DGTLLTRAVE PGTVLNEGGT VFTVSLTRPV
WVRAYVDERN LDQAQPGRKV LLYTDGRPDK PYHGQIGFVS PTAEFTPKTV ETPDLRTDLV
YRLRIVVTDA DDALRQGMPV TVQFGNEAGH E