| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0858 |
|---|
| Symbol | |
|---|
| ID | 5589289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 874296 |
|---|
| End bp | 875429 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640924568 |
|---|
| Product | ABC-2 type transporter, permease protein |
|---|
| Protein accession | YP_001461983 |
|---|
| Protein GI | 157155290 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACC CGATCCTTTC CTGGCGTCGC GTGCGGGCGC TGTGCGTCAA AGAGACGCGG
CAGATCGTTC GCGATCCGAG TAGCTGGCTG ATTGCGGTAG TGATCCCACT GCTACTGCTG
TTTATTTTTG GTTACGGCAT TAACCTCGAC TCCAGCAAGC TGCGGGTCGG GATTTTGCTG
GAACAGCGTA GCGAAGCGGC GCTGGATTTC ACCCACACCA TGACCGGTTC GCCCTACATC
GACGCCACCA TCAGCGATAA CCGTCAGGAA CTGATCGCCA AAATGCAGGC GGGGAAAATT
CGCGGTCTGG TGGTTATTCC CGTGGATTTC GCCGAACAGA TGGAGCGCGC CAACGCCACC
GCACCGATTC AGGTGATCAC CGACGGCAGT GAGCCGAATA CCGCTAACTT TGTGCAGGGG
TATGTCGAAG GGATCTGGCA GATCTGGCAA ATGCAGCGGG CGGAGGACAA CGGGCAGACC
TTTGAGCCGC TTATTGATGT ACAAACCCGC TACTGGTTTA ACCCGGCGGC GATTAGCCAG
CACTTTATTA TCCCCGGTGC GGTGACCATC ATCATGACGG TCATCGGCGC GATTCTCACC
TCGCTGGTGG TGGCGCGAGA ATGGGAACGC GGCACCATGG AGGCTCTGCT CTCTACGGAG
ATTACCCGCA CGGAGCTGCT GCTGTGTAAG CTGATCCCCT ATTACTTTCT CGGGATGCTG
GCGATGCTGC TGTGTATGCT GGTGTCGGTG TTTATTCTCG GCGTGCCGTA TCGCGGGTCG
CTGCTGATTC TGTTTTTTAT CTCCAGCCTG TTTTTACTCA GTACCCTGGG GATGGGGCTG
CTGATTTCCA CGATTACCCG CAACCAGTTC AATGCCGCTC AGGTCGCCCT GAACGCCGCG
TTCCTGCCGT CGATTATGCT CTCTGGCTTT ATTTTTCAGA TCGACAGTAT GCCCGCGGTG
ATCCGCGCGG TGACGTACAT TATTCCCGCT CGTTATTTCG TCAGCACCCT GCAAAGCCTG
TTCCTCGCCG GGAATATTCC AGTGGTGCTG GTGGTAAACG TGCTGTTTTT GATCGCTTCG
GCGGTGATGT TTATCGGCCT GACGTGGCTG AAAACCAAAC GTCGGCTGGA TTAG
|
|---|
| Protein sequence | MSNPILSWRR VRALCVKETR QIVRDPSSWL IAVVIPLLLL FIFGYGINLD SSKLRVGILL
EQRSEAALDF THTMTGSPYI DATISDNRQE LIAKMQAGKI RGLVVIPVDF AEQMERANAT
APIQVITDGS EPNTANFVQG YVEGIWQIWQ MQRAEDNGQT FEPLIDVQTR YWFNPAAISQ
HFIIPGAVTI IMTVIGAILT SLVVAREWER GTMEALLSTE ITRTELLLCK LIPYYFLGML
AMLLCMLVSV FILGVPYRGS LLILFFISSL FLLSTLGMGL LISTITRNQF NAAQVALNAA
FLPSIMLSGF IFQIDSMPAV IRAVTYIIPA RYFVSTLQSL FLAGNIPVVL VVNVLFLIAS
AVMFIGLTWL KTKRRLD
|
|---|
| |