Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0824 |
Symbol | |
ID | 5588743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 844933 |
End bp | 846015 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640924534 |
Product | outer membrane porin protein LC |
Protein accession | YP_001461949 |
Protein GI | 157157576 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.166078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TAACAGTGGC AATTTCTGCT GTAGCTGCAT CAGTACTGAT GGCGATGTCT GCTCAGGCAG CTGAAATTTA TAATAAAGAC AGTAACAAGC TGGATCTGTA CGGGAAAGTT AATGCTAAGC ACTACTTCTC CTCTAATGAT GCAGATGATG GTGATACTAC TTATGCCCGT CTTGGCTTCA AAGGTGAAAC CCAAATCAAC GATCAACTGA CTGGTTTCGG TCAGTGGGAA TATGAATTCA AAGGCAACCG CGCTGAATCT CAAGGTTCCT CCAAAGACAA AACCCGTCTT GCATTTGCAG GCCTGAAATT CGGTGACTAC GGCTCAATCG ATTACGGCCG TAACTACGGT GTAGCATACG ACATCGGTGC GTGGACTGAC GTTCTGCCAG AATTCGGTGG CGATACCTGG ACCCAAACAG ATGTATTCAT GACTGGTCGC ACCACAGGTG TTGCAACTTA TCGTAACAAC GACTTCTTTG GTCTGGTTGA TGGCCTGAAC TTTGCAGCTC AGTATCAGGG CAAAAATGAC CGAAATGAAG TAACTGAAGC TAATGGCGAT GGTTTCGGTT TCTCAACTAC TTATGAGTAT GAAGGATTCG GCGTGGGTGC AACCTATGCT AAATCTGATC GCACTAATAA TCAGGTTATC TACGGTAACA ACGGTCTGAA TGCTTCTGGT CAAAATGCTG AAGTATGGGC AGCTGGTCTG AAATATGATG CGAACAACAT CTATCTGGCC ACCACCTATT CTGAAACCCA GAACATGACT GTTTTTGGTA ATAACCATAT TGCCAACAAA GCACAAAACT TCGAAGCTGT TGCACAATAT CAGTTCGACT TCGGCCTGCG TCCATCCGTT GCTTACCTGC ATTCTAAAGG AAAAGACTTG GGTGTTTGGG GTGATCAGGA CCTGGTTGAA TATGTTGATG TAGGTGCAAC CTATTACTTC AACAAAAATA TGTCCACTTT TGTTGACTAC AAAATCAACC TGATTGATAA GAGCGATTTC ACGAAAGCAT CTGGCGTTGC TACCGATGAT ATCGTTGCTG TAGGTATGGT TTACCAGTTC TAA
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Protein sequence | MKKLTVAISA VAASVLMAMS AQAAEIYNKD SNKLDLYGKV NAKHYFSSND ADDGDTTYAR LGFKGETQIN DQLTGFGQWE YEFKGNRAES QGSSKDKTRL AFAGLKFGDY GSIDYGRNYG VAYDIGAWTD VLPEFGGDTW TQTDVFMTGR TTGVATYRNN DFFGLVDGLN FAAQYQGKND RNEVTEANGD GFGFSTTYEY EGFGVGATYA KSDRTNNQVI YGNNGLNASG QNAEVWAAGL KYDANNIYLA TTYSETQNMT VFGNNHIANK AQNFEAVAQY QFDFGLRPSV AYLHSKGKDL GVWGDQDLVE YVDVGATYYF NKNMSTFVDY KINLIDKSDF TKASGVATDD IVAVGMVYQF
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