Gene EcE24377A_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0824 
Symbol 
ID5588743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp844933 
End bp846015 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID640924534 
Productouter membrane porin protein LC 
Protein accessionYP_001461949 
Protein GI157157576 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.166078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAACAGTGGC AATTTCTGCT GTAGCTGCAT CAGTACTGAT GGCGATGTCT 
GCTCAGGCAG CTGAAATTTA TAATAAAGAC AGTAACAAGC TGGATCTGTA CGGGAAAGTT
AATGCTAAGC ACTACTTCTC CTCTAATGAT GCAGATGATG GTGATACTAC TTATGCCCGT
CTTGGCTTCA AAGGTGAAAC CCAAATCAAC GATCAACTGA CTGGTTTCGG TCAGTGGGAA
TATGAATTCA AAGGCAACCG CGCTGAATCT CAAGGTTCCT CCAAAGACAA AACCCGTCTT
GCATTTGCAG GCCTGAAATT CGGTGACTAC GGCTCAATCG ATTACGGCCG TAACTACGGT
GTAGCATACG ACATCGGTGC GTGGACTGAC GTTCTGCCAG AATTCGGTGG CGATACCTGG
ACCCAAACAG ATGTATTCAT GACTGGTCGC ACCACAGGTG TTGCAACTTA TCGTAACAAC
GACTTCTTTG GTCTGGTTGA TGGCCTGAAC TTTGCAGCTC AGTATCAGGG CAAAAATGAC
CGAAATGAAG TAACTGAAGC TAATGGCGAT GGTTTCGGTT TCTCAACTAC TTATGAGTAT
GAAGGATTCG GCGTGGGTGC AACCTATGCT AAATCTGATC GCACTAATAA TCAGGTTATC
TACGGTAACA ACGGTCTGAA TGCTTCTGGT CAAAATGCTG AAGTATGGGC AGCTGGTCTG
AAATATGATG CGAACAACAT CTATCTGGCC ACCACCTATT CTGAAACCCA GAACATGACT
GTTTTTGGTA ATAACCATAT TGCCAACAAA GCACAAAACT TCGAAGCTGT TGCACAATAT
CAGTTCGACT TCGGCCTGCG TCCATCCGTT GCTTACCTGC ATTCTAAAGG AAAAGACTTG
GGTGTTTGGG GTGATCAGGA CCTGGTTGAA TATGTTGATG TAGGTGCAAC CTATTACTTC
AACAAAAATA TGTCCACTTT TGTTGACTAC AAAATCAACC TGATTGATAA GAGCGATTTC
ACGAAAGCAT CTGGCGTTGC TACCGATGAT ATCGTTGCTG TAGGTATGGT TTACCAGTTC
TAA
 
Protein sequence
MKKLTVAISA VAASVLMAMS AQAAEIYNKD SNKLDLYGKV NAKHYFSSND ADDGDTTYAR 
LGFKGETQIN DQLTGFGQWE YEFKGNRAES QGSSKDKTRL AFAGLKFGDY GSIDYGRNYG
VAYDIGAWTD VLPEFGGDTW TQTDVFMTGR TTGVATYRNN DFFGLVDGLN FAAQYQGKND
RNEVTEANGD GFGFSTTYEY EGFGVGATYA KSDRTNNQVI YGNNGLNASG QNAEVWAAGL
KYDANNIYLA TTYSETQNMT VFGNNHIANK AQNFEAVAQY QFDFGLRPSV AYLHSKGKDL
GVWGDQDLVE YVDVGATYYF NKNMSTFVDY KINLIDKSDF TKASGVATDD IVAVGMVYQF