Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0721 |
Symbol | kdpD |
ID | 5585937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 743242 |
End bp | 745926 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640924437 |
Product | sensor protein KdpD |
Protein accession | YP_001461857 |
Protein GI | 157157107 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.594911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACG AACCCTTACG TCCCGACCCC GATCGTCTGC TGGAACAAAC TGCCGCGCCG CATCGGGGGA AGCTGAAAGT TTTCTTCGGT GCCTGTGCAG GCGTCGGGAA GACCTGGGCG ATGCTGGCAG AAGCACAGCG ACTGCGGACG CAAGGGCTGG ATATTGTGGT TGGCGTGGTA GAAACCCACG GGCGGAAAGA TACCGCCGCC ATGCTGGAAG AGCTGGCTGT TCTGCCGCCA AAACGCCTGG CGTACCGTGG GCGGCATATC AGCGAGTTTG ATCTCGATGC CGCCCTCGCC CGCCGTCCGG CGCTGATCTT AATGGACGAA CTGGCGCACA GTAATGCGCC TGGTTCTCGT CATCCCAAAC GCTGGCAGGA TATTGAAGAG CTGCTGGAAG CAGGCATTGA TGTTTTTACT ACCGTCAACG TTCAACATCT GGAAAGCCTG AATGATGTGG TCAGCGGCGT CACCGGAATT CAGGTACGGG AAACCGTGCC CGATCCTTTT TTCGATGCCG CCGACGACGT GGTTCTGGTG GACTTGCCCC CGGACGATCT GCGCCAGCGG CTGAAAGAAG GCAAAGTCTA TATTGCCGGG CAGGCGGAGC GCGCCATTGA ACATTTTTTC CGCAAAGGCA ATCTGATCGC CCTGCGCGAA CTGGCACTGC GCCGTACTGC CGATCGCGTA GATGAGCAAA TGCGCGCCTG GCGGGGGCAT CCTGGCGAAG AGAAAGTGTG GCACACGCGC GACGCGATCC TTTTATGCAT CGGGCATAAC ACCGGCAGTG AGAAACTGGT CCGCGCGGCG GCGCGGCTGG CGTCGCGGCT GGGTAGCGTC TGGCACGCGG TGTATGTTGA AACCCCTGCC CTGCATCGCT TACCGGAGAA AAAACGTCGG GCAATTCTCA GCGCCTTACG TCTGGCGCAG GAGCTGGGCG CGGAGACGGC AACACTTTCT GATCCAGCGG AAGAGAAAGC GGTAGTGCGT TATGCCCGTG AACATAATCT CGGCAAGATT ATTCTCGGTC GCCCAGCCTC GCGCCGCTGG TGGCGTCGGG AAACGTTTGC TGACCGACTG GCGCGCATCG CCCCCGATCT CGATCAGGTG CTGGTCGCGC TTGATGAACC ACCCGCCCGC ACGATTAACA ACGCGCCGGA TAGCCGCTCT TTTAAAGACA AGTGGCGGGT ACAGATTCAG GGATGCGTGG TTGCCGCCGC GTTATGCGCC GTTATCACTT TAATTGCCAT GCAGTGGCTG ATGGCGTTTG ATGCCGCCAA CCTGGTGATG CTGTATCTGC TTGGCGTGGT GGTAGTGGCG CTATTTTATG GACGCTGGCC TTCGGTGGTT GCTACCGTCA TTAATGTGGT GAGTTTCGAT CTCTTTTTTA TCGCCCCACG CGGCACGCTC GCCGTCTCTG ATGTGCAATA TCTGCTGACC TTCGCGGTGA TGTTAACCGT CGGGCTGGTG ATCGGGAACC TTACTGCTGG CGTGCGTTAT CAGGCGCGGG TAGCCCGTTA CCGCGAGCAA CGCACACGGC ACTTATATGA AATGTCGAAA GCTCTGGCGG TGGGCCGCAG TCCGCAGGAC ATCGCCGCCA CCAGCGAACA ATTTATTGCC TCCACGTTTC ATGCCCGCAG TCAGGTGTTG TTGCCCGATG ACAACGGTAA ATTGCAGCCG TTAACACATC CGCAAGGAAT GACGCCATGG GACGATGCCA TCGCGCAGTG GAGTTTTGAT AAAGGCCTGC CTGCGGGTGC GGGCACCGAC ACGTTACCCG GCGTGCCGTA CCAGATTTTG CCGCTAAAAA GCGGCGAGAA AACCTACGGA CTGGTGGTGG TGGAACCGGG GAATCTGCGC CAGTTGATGA TCCCGGAGCA GCAGCGCCTG CTGGAGACAT TTACGCTGTT AGTCGCCAAT GCCCTTGAGC GGCTGACACT GACCGCCAGC GAAGAACAGG CGCGGATGGC AAGCGAACGT GAACAGATCC GCAACGCCCT GCTGGCGGCG CTTTCGCATG ATTTACGCAC GCCGCTTACG GTGCTGTTTG GTCAGGCAGA AATCTTAACG CTCGATCTGG CAAGCGAAGG ATCGCCCCAC GCCCGCCAGG CCAGCGAGAT TCGTCAGCAT GTGCTGAACA CTACCCGACT GGTGAATAAT CTACTGGATA TGGCGCGAAT TCAGTCCGGC GGCTTTAATT TGAAGAAAGA GTGGTTAACG CTGGAAGAAG TGGTCGGTAG CGCGCTGCAA ATGCTGGAAC CGGGTTTATC GTCGCCCATC AATCTTTCTC TGCCAGAACC GCTGACCTTA ATCCACGTTG ACGGGCCACT CTTTGAACGG GTGCTGATTA ATCTGCTGGA GAACGCGGTG AAATATGCGG GTGCGCAGGC CGAAATTGGT ATCGATGCCC ACGTTGAGGG CGAAAATCTA CAACTGGATG TCTGGGATAA CGGCCCCGGT CTTCCGCCAG GCCAGGAGCA GACGATATTT GATAAGTTTG CTCGCGGGAA TAAAGAGTCG GCAGTACCGG GGGTAGGGCT TGGACTGGCA ATTTGTCGGG CGATAGTGGA TGTACACGGG GGCACTATTA CCGCGTTCAA CCGACCGGAA GGTGGTGCCT GTTTTCGTGT TACACTTCCC CAGCAAACCG CTCCTGAACT TGAAGACTTT CATGAGGATA TGTGA
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Protein sequence | MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRT QGLDIVVGVV ETHGRKDTAA MLEELAVLPP KRLAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DEQMRAWRGH PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL ARIAPDLDQV LVALDEPPAR TINNAPDSRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNGPG LPPGQEQTIF DKFARGNKES AVPGVGLGLA ICRAIVDVHG GTITAFNRPE GGACFRVTLP QQTAPELEDF HEDM
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