Gene EcE24377A_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0718 
SymbolspeF 
ID5590857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp739680 
End bp741887 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content48% 
IMG OID640924434 
Productornithine decarboxylase 
Protein accessionYP_001461854 
Protein GI157158479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.76053e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA TGTCAGAATT AAAAATTGCC GTTAGTCGTT CTTGCCCGGA TTTTTTTTCC 
ACTCATCGTG CATGCGTGAA TATAGACGAA AGTAATTATA TTGACGTTGC CGCCATTATT
TTATCAGTCA GTGATGTTGA ACGTGGAAAA CTCGATGAAA TAGACGCTAC TGGCTATGAC
ATTCCTGTTT TTATTGCAAC GGAAAATGAA GAACGTGTAC CCGCAGAATA TCTGCCACGT
ATTTCTGGTG TCTTCGAACA TTGCGAATCA CGTAAAGAGT TTTATGGACG TCAGTTAGAA
ACCGCTGCCA GCCATTATGA AACGCAACTG CGCCCGCCCT TCTTCCGCGC ACTGGTCGAT
TATGTTAATC AGGGCAATAG TGCTTTTGAC TGCCCTGGTC ATCAGGGGGG TGAGTTTTTC
CGTCGCCATC CGGCAGGCAA TCAGTTCGTG GAATACTTTG GCGAAATGCT CTTCCGCTCT
GACTTGTGTA ATGCTGACGT AGCAATGGGC GATCTGCTGA TTCATGAAGG TGCGCCATGT
ATTGCACAAC AGCATGCGGC TAAAGTCTTT AATGCCGATA AAACCTATTT CGTTTTAAAC
GGTACTTCAT CTTCTAATAA AGTGGTCTTA AACGCATTGC TGACGCCGGG CGATCTGGTG
TTGTTTGACC GCAATAACCA TAAATCTAAC CACCACGGTG CGTTGCTACA GGCTGGCGCG
ACACCGGTTT ATCTGGAAAC CGCACGTAAC CCGTATGGCT TTATCGGTGG CATTGATGCG
CACTGTTTTG AAGAAAGTTA CCTGCGTGAG CTGATTACAG AAGTTGCACC GCAGCGGGCA
AAAGAGGCTC GTCCTTTCCG CCTCGCCGTT ATTCAGCTAG GCACTTACGA CGGTACGATT
TATAACGCCC GTCAGGTGGT GGATAAAATT GGTCATCTGT GTGACTACAT CCTCTTTGAC
TCCGCATGGG TCGGCTATGA ACAGTTTATT CCGATGATGG CTGACTGTTC GCCGCTGTTG
CTGGATCTTA ATGAGAACGA TCCGGGTATT CTGGTTACGC AATCCGTACA TAAACAGCAG
GCTGGTTTTT CTCAAACTTC ACAAATCCAT AAAAAAGACA GCCACATCAA AGGGCAACAG
CGTTATGTAC CGCACAAACG CATGAACAAC GCCTTTATGA TGCACGCCTC CACCAGCCCG
TTCTATCCGC TGTTTGCCGC ACTGGATATC AACGCCAAAA TGCATGAAGG TGTCAGCGGT
CGTAATATGT GGATGGATTG TGTGGTAAAT GGCATTAATG CCCGCAAACT GATCCTCGAT
AACTGTCAGC ATATTCGTCC GTTCGTACCT GAACTGGTGG ATGGTAAACC CTGGCAGTCG
TATGAAACGG CGCAAATTGC GGTTGATCTG CGCTTCTTCC AGTTTGTACC AGGGGAACAC
TGGCATTCTT TTGAAGGCTA TGCAGAGAAT CAATACTTTG TCGATCCTTG CAAACTGTTG
CTGACAACCC CAGGTATTGA TGCACGTAAC GGCGAATATG AAGCGTTCGG TGTACCCGCG
ACGATTCTTG CTAACTTCCT GCGCGAAAAT GGCGTAGTGC CGGAAAAATG CGATCTTAAC
TCCATCCTCT TCCTGCTGAC TCCGGCAGAA GATATGGCCA AGCTTCAGCA ACTTGTTGCC
CTGCTGGTAC GCTTCGAAAA ACTGCTTGAG TCCGACGCGC CATTAGCAGA AGTGCTGCCT
TCCATCTACA AACAGCATGA AGAGCGCTAC GCCGGTTATA CCCTGCGTCA GTTGTGTCAA
GAAATGCATG ATTTGTATGC CCGTCACAAC GTGAAACAAC TGCAAAAAGA GATGTTCCGT
AAGGAACACT TCCCACGCGT AAGCATGAAT CCGCAAGAAG CCAACTACGC CTATTTACGC
GGTGAAGTGG AGCTGGTTCG TCTGCCGGAT GCAGAAGGCC GTATCGCTGC CGAAGGTGCG
CTTCCTTATC CTCCGGGTGT GCTGTGTGTT GTTCCGGGTG AAATCTGGGG TGGTGCTGTT
TTGCGTTACT TCAGCGCTCT GGAAGAAGGG ATCAACCTGC TGCCAGGTTT TGCACCGGAG
CTGCAGGGTG TCTATATCGA AGAACATGAT GGTCGTAAGC AAGTTTGGTG CTATGTCATC
AAGCCTCGTG ATGCGCAAAG CACCCTGTTG AAAGGGGAAA AATTATGA
 
Protein sequence
MNKMSELKIA VSRSCPDFFS THRACVNIDE SNYIDVAAII LSVSDVERGK LDEIDATGYD 
IPVFIATENE ERVPAEYLPR ISGVFEHCES RKEFYGRQLE TAASHYETQL RPPFFRALVD
YVNQGNSAFD CPGHQGGEFF RRHPAGNQFV EYFGEMLFRS DLCNADVAMG DLLIHEGAPC
IAQQHAAKVF NADKTYFVLN GTSSSNKVVL NALLTPGDLV LFDRNNHKSN HHGALLQAGA
TPVYLETARN PYGFIGGIDA HCFEESYLRE LITEVAPQRA KEARPFRLAV IQLGTYDGTI
YNARQVVDKI GHLCDYILFD SAWVGYEQFI PMMADCSPLL LDLNENDPGI LVTQSVHKQQ
AGFSQTSQIH KKDSHIKGQQ RYVPHKRMNN AFMMHASTSP FYPLFAALDI NAKMHEGVSG
RNMWMDCVVN GINARKLILD NCQHIRPFVP ELVDGKPWQS YETAQIAVDL RFFQFVPGEH
WHSFEGYAEN QYFVDPCKLL LTTPGIDARN GEYEAFGVPA TILANFLREN GVVPEKCDLN
SILFLLTPAE DMAKLQQLVA LLVRFEKLLE SDAPLAEVLP SIYKQHEERY AGYTLRQLCQ
EMHDLYARHN VKQLQKEMFR KEHFPRVSMN PQEANYAYLR GEVELVRLPD AEGRIAAEGA
LPYPPGVLCV VPGEIWGGAV LRYFSALEEG INLLPGFAPE LQGVYIEEHD GRKQVWCYVI
KPRDAQSTLL KGEKL