Gene EcE24377A_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0685 
Symbol 
ID5589471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp710879 
End bp712756 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content49% 
IMG OID640924401 
ProductS54 family peptidase 
Protein accessionYP_001461827 
Protein GI157159255 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.085166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAT CTTCGGTTAA GCCGTTAAAT GTTCAATTAC CCGCAATAAC CCTTATCCTT 
TTTGCGCTCT GTGTTGGGAT ATTTTGTTAC TTCGCACAAT GGATGAGTTA TGAAGAAGTC
GATCAATCCG CACTCATCCA TCTCGGTGCT AACGTTGCTT CTCTCACGTT GTCGGGTGAA
TCCTGGCGCT TATTGAGCAG TGTCTTTCTG CACAGCAGTG TTTCTCATTT GCTGATGAAT
ATGTTTGCAC TCCTGGTGGT GGGGGGAGTG GTGGAACGTA TTCTGGGGAA ATGGCGACTC
CTGATTGTCT GGCTATTCTC TGGCGTCTTT GGTGGGCTAA TCAGCGCCTG TTATGCGTTA
CGCGAAAGTG AGCAGATAGT CATCAGCGTT GGGGCGTCCG GGGCAATTAT GGGAATAGCT
GGCGCTGCGA TAGCAACACA GCTTGCTTCA GGTGCGGGCA CACACCATAA AAACCAGCGG
CGAGTATTTC CTCTGTTGGG TATGGTGGCG CTGACACTGT TGTACGGTGC CCGGCAAACA
GGAATAGATA ACGCTTGCCA CATTGGCGGC CTGATTGCGG GTGGCGCGTT GGGTTGGCTG
AGCGCGTGTT TATCTGGGCA AAACCGACTC GTTACGGAAG GCGGGATTAT TGTTGCGGGC
AGTCTTCTTC TGACCGGGGC TATCTGGCTT GCGCAGCAGC AGATGGATGA GTCAGTTTTA
CAGGTCAGGC AAAGCCTGCG TGAAGCGTTT TATCCGCAGG AGATTGAACA AGAGCGACGA
CAAAAAAAAC AACAGTTAGC GGAGGAACGC AACGCCCTCA GGGAAACATT ATCCGCTCCG
GTAAGTCGTG AACAGGCCAG TGGTGATTTA CTCGCTGAGA TTGCCGATAT CCATGATATG
GCGATCAGTC GGGATGGTAA TACGTTGTAT GCCGCAATTG AAAACACCAA CAGCATTATT
GTTTTCGACC TCGGACAAAA GAAAATCCTG CATACCTTTA CAGCGCCCAT AGCGAAAGAA
AAGTCAGTCA AACATTGTGG TGGCTGTAAA GATCAGGGCG TCAGATCGCT GGCATTAAGC
CCGGATGAAA AGTTGATTTA TGCGACTTCA TTTGAAGCGA ATGCGTTATC GGTCATTAAC
GTGGCGACAG GGGAGATTAT TCAGTCGATT ACCACCGGTG CACATCCTGA CAGCCTTATC
CTCTCGCGTG ATGGCACAAA AGCCTGGGTG ATGAATCGCA CCAGTAATAG TGTGTCAGCG
ATTGATCTGG TGACTTATCA GCATGTGGCG GATATCCCGC TGGAGAAATA CGACGGGACG
GGGACGAGTA ATAAACCTGG TGCCTGGGTT ATGGCTCTTT CCCCGGATGA AAAAATATTG
TTGATACCCG GTATGGTCAG AGGTGACATT GTACGCATCA ATACCATCAC GCATCAGAAA
GAAAGCTATC CGGCTAGTGA TGCGCGAGGA ACGATATCGG CGATGCGTTT TCGACCTGAA
AACGGGGATG TAATTTTTGC CGACAGCCAG GGGATTACAC GTATAAGCGT AGGGGATCAA
CAAGCCAGCA TTATGACGCA ATGGTGTAGC AGGAGCGTTT ATTCCGTTGA GGGTATTAGC
CCGGACGGTC AGTATTTAGC GTTGGTGTCA TATGGCCTGC AAGGTTATGT CATCCTGCTC
AATATTAATG CCGGGCAGAT TATTGGCGTT TATCCTGCCA GCTACGTTAA TCACCTTCGT
TTTTCAGCGG ATGGTAGAAA AATATTTGTT ATGGCGAAGA ACGGGTTGAT CCAACTGGAC
AGGACGCGCT CGCTTGATCC GCAGGCAATT ATTCGTCATC CCCAATATGG CAATGTGGCT
TGTATCCCTG AACCGTAA
 
Protein sequence
MSASSVKPLN VQLPAITLIL FALCVGIFCY FAQWMSYEEV DQSALIHLGA NVASLTLSGE 
SWRLLSSVFL HSSVSHLLMN MFALLVVGGV VERILGKWRL LIVWLFSGVF GGLISACYAL
RESEQIVISV GASGAIMGIA GAAIATQLAS GAGTHHKNQR RVFPLLGMVA LTLLYGARQT
GIDNACHIGG LIAGGALGWL SACLSGQNRL VTEGGIIVAG SLLLTGAIWL AQQQMDESVL
QVRQSLREAF YPQEIEQERR QKKQQLAEER NALRETLSAP VSREQASGDL LAEIADIHDM
AISRDGNTLY AAIENTNSII VFDLGQKKIL HTFTAPIAKE KSVKHCGGCK DQGVRSLALS
PDEKLIYATS FEANALSVIN VATGEIIQSI TTGAHPDSLI LSRDGTKAWV MNRTSNSVSA
IDLVTYQHVA DIPLEKYDGT GTSNKPGAWV MALSPDEKIL LIPGMVRGDI VRINTITHQK
ESYPASDARG TISAMRFRPE NGDVIFADSQ GITRISVGDQ QASIMTQWCS RSVYSVEGIS
PDGQYLALVS YGLQGYVILL NINAGQIIGV YPASYVNHLR FSADGRKIFV MAKNGLIQLD
RTRSLDPQAI IRHPQYGNVA CIPEP