| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0245 |
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| Symbol | |
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| ID | 5589586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 263220 |
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| End bp | 265361 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640923974 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001461404 |
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| Protein GI | 157159093 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACGCTGGAA GTGGACGGCC TGCCACCGGA TGCTTTTGCG
GTGGTCTCCT TTCATCTGAA CCAGTCACTC TCTTCGCTTT TTTCCCTCGA TCTCTCTCTG
GTCAGCCAGC AGTTTCTCTC CCTTGAATTC CAGCAGATCC TCGACAAAAT GGCCTACCTG
ACGATATGGC AGGGCGATGA CGTACAGCGC CGGGTGAAAG GTATGGTGAC CTGGTTTGAA
CTGGGGGAGA ACGACAAAAA CCAGATGCTG TACAGCATGA AGGTGTGCCC ACCGCTGTGG
CGCACAGGGC TGCGCCAGAA CTTCCGTATC TTCCAGAATG AGGACATCGA AAGCATCCTT
GGCACGATAT TGCAGGAAAA CGGGGTGACC GAGTGGAGCC CGCTGTTCAG CGATCCACAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGT GAGACTGATT ACGATTTCCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCACGCGC AAAAAAGTAC CGACCAGAGC
CTGGTCCTGT GCGATACCGT GCGTTATCTG CCGGAGTCCT TTGAGATCCC CTGGAATCCG
AACACCCGTA CCGAGGTGAG CACCCTCTGC ATCAGCCAGT TTCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAAGACTAC ACCTTTAAAC GACCCGGCTG GGCAGGGCGT
TTTGATCAGG AAGGCCAGTA CCAGGATTAC CAGCGCACAC AGTATGAAGT GTATGACTAC
CCCGGACGTT TCAAGGGTGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGATGGCTGG
CGCAACAACG CAGAAGTGGC GCGCGGAACA AGCCGTTCGC CGGAGATATG GCCGGGACGG
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCG
AGCGATCTTC ACGGCGAACA GCCGCAGGCG GTACCGGGAC GCAGGGGTTC AGGCACCACG
CTGGATAACC ACTTTGCGGT AATCCCGGCA GACCGGACAT GGCGGCCACA GCCGTTGCTG
AAACCGCTGG TGGACGGCCC GCAGAGCGCC GTCGTGACGG GACCGGCAGG CGAGGAAATC
TTCTGTGATG AACATGGCCG CGTGCGGGTG AAATTTAACT GGGACCGCTA TAACCCGTCA
AACCAGGAAA GTTCATGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGCTTTGGT
AACCTGGCGA TACCGCGTGT GGGTCAGGAG GTCATTGTGG ACTTCCTCAA CGGCGATCCG
GACCAGCCGA TCATTATGGG GCGTACCTAC CACCAGGAAA ACCGCACCCC CGGCAGCCTG
CCGGGGACGA AGACGCAGAT GACGATCCGC TCGAAAACCT ATAAGGGCAG CGGGTTTAAT
GAACTGAAGT TTGACGATGC GACAGGGAAA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGAACACCG AGGTGCTGAA TAACCGCACC ACTGATGTGA TAAACAACCA TGCCGAAAAA
ATAGGTAACA ACCAGGCGAT CACCGTTACC AATAACCAGA TCCAGAACAT TGGCGTTAAT
CAGATACAGA CGGTTGGTGT CAACCAGGTG GAAACGGTGG GCAGTAACCA GATTATCAAA
GTGGGATCAA ACCAGGTTGA AAAGGTGGGG ATCATTCGTG CGCTGACGGT GGGTGTGGCT
TACCAGACGA CGGTAGGCGG CATTATGAAT ACCTCGGTGG CGTTGTTGCA GTCCTCACAG
GTAGGGCTGC ATAAATCACT GATGGTGGGA ATGGGCTACA GCGTCAATGT GGGGAATAAC
GTCACCTTCT CGGTGGGCAA GACAATGAAG GAAAACACCG GACAAACAGC AGTTTATTCT
GCCGGTGAGC ATCTTGAACT CTGCTGTGGT AAGGCAAGGC TGGTGCTGAC GAAGGACGGA
AGCATATTTC TCAATGGTAC GCACATTCAT CTGGAAGGGG AGTCGGATGT GAACGGTGAT
GCGCCAGTGA TTAACTGGAA CTGTGGTGCC ACACAACCTG TACCGGATGC GCCTGTGCCG
AAAGATTTAC CCCCCGGAAT GCCGGATATG CGGCAATTTT GA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLNQSL SSLFSLDLSL VSQQFLSLEF QQILDKMAYL
TIWQGDDVQR RVKGMVTWFE LGENDKNQML YSMKVCPPLW RTGLRQNFRI FQNEDIESIL
GTILQENGVT EWSPLFSDPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAQKSTDQS
LVLCDTVRYL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FDQEGQYQDY QRTQYEVYDY PGRFKGAHGQ NFARWQMDGW RNNAEVARGT SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SDLHGEQPQA VPGRRGSGTT LDNHFAVIPA DRTWRPQPLL
KPLVDGPQSA VVTGPAGEEI FCDEHGRVRV KFNWDRYNPS NQESSCWIRV AQAWAGTGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRTPGSL PGTKTQMTIR SKTYKGSGFN
ELKFDDATGK EQVYIHAQKN MNTEVLNNRT TDVINNHAEK IGNNQAITVT NNQIQNIGVN
QIQTVGVNQV ETVGSNQIIK VGSNQVEKVG IIRALTVGVA YQTTVGGIMN TSVALLQSSQ
VGLHKSLMVG MGYSVNVGNN VTFSVGKTMK ENTGQTAVYS AGEHLELCCG KARLVLTKDG
SIFLNGTHIH LEGESDVNGD APVINWNCGA TQPVPDAPVP KDLPPGMPDM RQF
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