Gene EcE24377A_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0236 
Symbol 
ID5588261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp256189 
End bp257271 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID640923965 
Producthypothetical protein 
Protein accessionYP_001461395 
Protein GI157158454 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGAA AGAACCGGGC AGCATCCTCT TATCTGAGTC CGGGAAATCC CTCGGCAGAT 
AAAGAGCAGA ATGAGCCGCT GGCACAGGTT TTTCATAACG CCTGCTCTTA CAATTTTTTT
GCGATGGCGG AGCTGTTGCA CCGCCTGGCA CAGGGTGAAA AGGGGACGCC AGAATTATCC
CTGCGCGACG ATCCGACACA GGAAACCCTG CGTTTCAGCG CCGATGCCAG CCTTGCGTTT
CCCCTGAGTG ATATCAGTGC GCTGAAACGG GATACGTCAG GGGCATTCAG GATGACCACC
ACCTTTATGG GGTTACAGGG GAGCCAGTCG CCTCTCCCCG GTTATTACCT CGATCACCTG
GCCTGGAAAG CGGTACATGA ACAAAGTCCG GTAGGTGATT TTCTGGATAT GTTCAGCCAC
CGCCTGACCC AGTTTGTCTG GCATATCTGG CGTAAGTACC GCTATCACAT CAGTTTTCGT
AACGGCGGTG TGGATGCGTT CTCGCAGCGC ATGTACTCCC TTGTCGGGCT GGGCCACCGC
CAGCTTCGCG ATAAGCTGGC GATTAATCAC AGCAAAATGC TGGCGTATTC CGGGATCCTG
GCAAACCCGG GGCGATCCCC GGAAATTATC TGTGGCCTGG TGTCCCACTG CTTTGATTTG
TCAGAAGTGA CGCTGCAAAA CTGGCAGCGT CGCAAGGTGG ATATTGAACC GGATCAGCAA
AATAGTCTGG GGAGCTATTC ACTTAAAAAT GGCGAAAAAC TGGCGGGAAG ATCGGTACTG
GGCAACTTTG TTCTGGGTAC ACGGGTGCCC GATCTCAGCG GAAAATTCCA GCTCAGTATT
ACCAGCCTGA CCCGAAAACA GTTCCTCTCT TTTCTGCCGT CCGGCGAAAA CTTCCTGCCA
CTGACGATGT TTGTGTCCTT CATCCTGCGC GATCAGCTTG CCTGGGACTT ACATCTGGGG
CTGGCGCCGG AGCAGGTGGG CGCAATGCGC CTGGGCGATA ACAAAAGTGC GCTGCTGGGC
TGGACCAGCT TCCTCGGCAC ACCGGAAGAA CGACCCTCAG TCACCATCAG GGTACGGTCG
TAA
 
Protein sequence
MDGKNRAASS YLSPGNPSAD KEQNEPLAQV FHNACSYNFF AMAELLHRLA QGEKGTPELS 
LRDDPTQETL RFSADASLAF PLSDISALKR DTSGAFRMTT TFMGLQGSQS PLPGYYLDHL
AWKAVHEQSP VGDFLDMFSH RLTQFVWHIW RKYRYHISFR NGGVDAFSQR MYSLVGLGHR
QLRDKLAINH SKMLAYSGIL ANPGRSPEII CGLVSHCFDL SEVTLQNWQR RKVDIEPDQQ
NSLGSYSLKN GEKLAGRSVL GNFVLGTRVP DLSGKFQLSI TSLTRKQFLS FLPSGENFLP
LTMFVSFILR DQLAWDLHLG LAPEQVGAMR LGDNKSALLG WTSFLGTPEE RPSVTIRVRS