Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0236 |
Symbol | |
ID | 5588261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 256189 |
End bp | 257271 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640923965 |
Product | hypothetical protein |
Protein accession | YP_001461395 |
Protein GI | 157158454 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAA AGAACCGGGC AGCATCCTCT TATCTGAGTC CGGGAAATCC CTCGGCAGAT AAAGAGCAGA ATGAGCCGCT GGCACAGGTT TTTCATAACG CCTGCTCTTA CAATTTTTTT GCGATGGCGG AGCTGTTGCA CCGCCTGGCA CAGGGTGAAA AGGGGACGCC AGAATTATCC CTGCGCGACG ATCCGACACA GGAAACCCTG CGTTTCAGCG CCGATGCCAG CCTTGCGTTT CCCCTGAGTG ATATCAGTGC GCTGAAACGG GATACGTCAG GGGCATTCAG GATGACCACC ACCTTTATGG GGTTACAGGG GAGCCAGTCG CCTCTCCCCG GTTATTACCT CGATCACCTG GCCTGGAAAG CGGTACATGA ACAAAGTCCG GTAGGTGATT TTCTGGATAT GTTCAGCCAC CGCCTGACCC AGTTTGTCTG GCATATCTGG CGTAAGTACC GCTATCACAT CAGTTTTCGT AACGGCGGTG TGGATGCGTT CTCGCAGCGC ATGTACTCCC TTGTCGGGCT GGGCCACCGC CAGCTTCGCG ATAAGCTGGC GATTAATCAC AGCAAAATGC TGGCGTATTC CGGGATCCTG GCAAACCCGG GGCGATCCCC GGAAATTATC TGTGGCCTGG TGTCCCACTG CTTTGATTTG TCAGAAGTGA CGCTGCAAAA CTGGCAGCGT CGCAAGGTGG ATATTGAACC GGATCAGCAA AATAGTCTGG GGAGCTATTC ACTTAAAAAT GGCGAAAAAC TGGCGGGAAG ATCGGTACTG GGCAACTTTG TTCTGGGTAC ACGGGTGCCC GATCTCAGCG GAAAATTCCA GCTCAGTATT ACCAGCCTGA CCCGAAAACA GTTCCTCTCT TTTCTGCCGT CCGGCGAAAA CTTCCTGCCA CTGACGATGT TTGTGTCCTT CATCCTGCGC GATCAGCTTG CCTGGGACTT ACATCTGGGG CTGGCGCCGG AGCAGGTGGG CGCAATGCGC CTGGGCGATA ACAAAAGTGC GCTGCTGGGC TGGACCAGCT TCCTCGGCAC ACCGGAAGAA CGACCCTCAG TCACCATCAG GGTACGGTCG TAA
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Protein sequence | MDGKNRAASS YLSPGNPSAD KEQNEPLAQV FHNACSYNFF AMAELLHRLA QGEKGTPELS LRDDPTQETL RFSADASLAF PLSDISALKR DTSGAFRMTT TFMGLQGSQS PLPGYYLDHL AWKAVHEQSP VGDFLDMFSH RLTQFVWHIW RKYRYHISFR NGGVDAFSQR MYSLVGLGHR QLRDKLAINH SKMLAYSGIL ANPGRSPEII CGLVSHCFDL SEVTLQNWQR RKVDIEPDQQ NSLGSYSLKN GEKLAGRSVL GNFVLGTRVP DLSGKFQLSI TSLTRKQFLS FLPSGENFLP LTMFVSFILR DQLAWDLHLG LAPEQVGAMR LGDNKSALLG WTSFLGTPEE RPSVTIRVRS
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