Gene EcE24377A_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0232 
Symbol 
ID5586638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp252263 
End bp253024 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content53% 
IMG OID640923961 
Producthypothetical protein 
Protein accessionYP_001461391 
Protein GI157158272 
COG category[S] Function unknown 
COG ID[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGG GGTCACTGTC TCTGCCACCA TTTACCGGAT ACGACGAAAA AAGCCAGCGC 
AACTACCATC TCGCGCTTCG TGGCAACAGC CTGAATCCGA TGATCGACGC GGCCACGCCG
CTACTCGGTA TGGTAATGCG CCTTTCAACC ATGAACAGCC AGACGATGCC GGAGCATCTT
TTTGCTCAGG TGGTGACGGA TGTTCAGGCC GTGGAGCAAC TGCTTCAGGA GCAGGGCTAC
GAACCGGGCG TGATTATCTC GTTTCGCTAC ATCCTCTGCA CGTTTATTGA TGAAGCGGCG
CTCGGTAACG GCTGGTCAAA CAAGAACGAG TGGATCAAGC AGTCATTGCT GGTCCATTTC
CACAACGAAG CCTGGGGTGG AGAGAAAGTT TTCATCCTGC TGGAGCGCCT GATCCGTGAA
CCCAAACGTT ACCAGGATCT GCTGGAATTT CTCTGGATCT GTTTTTCTCT GGGATTTCGC
GGGCGCTACA AAGTGGCAGC ACAGGATCAG GGGGAATTTG AGCAGATCTA CCGCCGTCTG
TACCACGTTC TGCATAAACT GCGCGGCGAT GCCCCTTTCC CGCTGTTACA CCAGGACAAA
AAAACCCAGG GCGGGCGTTA TCAGCTCATC AGTCGCCTGA CTGTTAAACA TATTTTTTGT
GGTGGCGTTG TCGTGCTGGC GTTGTTTTAC CTGTTCTATC TGTTGCGGCT GGACAGCCAG
ACGCAGGACA TCCTGCACCA GCTAAACAAA TTACTTCGAT AA
 
Protein sequence
MDEGSLSLPP FTGYDEKSQR NYHLALRGNS LNPMIDAATP LLGMVMRLST MNSQTMPEHL 
FAQVVTDVQA VEQLLQEQGY EPGVIISFRY ILCTFIDEAA LGNGWSNKNE WIKQSLLVHF
HNEAWGGEKV FILLERLIRE PKRYQDLLEF LWICFSLGFR GRYKVAAQDQ GEFEQIYRRL
YHVLHKLRGD APFPLLHQDK KTQGGRYQLI SRLTVKHIFC GGVVVLALFY LFYLLRLDSQ
TQDILHQLNK LLR