| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0229 |
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| Symbol | |
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| ID | 5589705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 247338 |
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| End bp | 248750 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640923958 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001461388 |
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| Protein GI | 157156439 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.865531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGG ACTTACGCGA TCCGAATGTC TGGATATCGC ACCTGCTGGA AAACCTGCCG
GAAGAGAAAC TGGCATCGGC GCTGAAAGAT GACAACCCGA ACTGGGAGTA TATCGACGGC
GAAATCGTCA AGCTGGGATC GCTGGCCCAC AGTCAACTGG ATATCCCGGA ACTCCAGCGC
CGTGGGCTGG TCATTCTGGC TTCGGAGAGT AAGGATTTTC GTCTGCTGGC GCATCTGCTG
AGAACCCTGC AACACGCCGG TGATCCTCAT CTCGCATTGC GCCTGCTGGC GCTGTATGTG
GAGCATTACT GGGCGGTGGC TGCGCCGCAG AATATGGCGC ATAAAAAACG CTTTGCCAGC
CAGGTCATTA AACGCTTTGA AACAGGTATT GAAGTTTTTT CACAGAACGC CGCCACAGCG
CAGCGCGATG CGCTGTCAGG GGAACTGGCA AAACTGGCGC AATGCTGGCA GTCACATAAC
GCCCCGGAAC TGGCACAGGC TACTGATGAT CTTTTTGCCC TGTACCAGCG TGCGTTTAAT
CGTGCGGCAC CGGCTCCTGT CCCCACTCCG GCGGCCTCCG GTAGTTCACC ACAGACCACC
GCCACGTCTG AAAGCGGCGT GACGCAACCC AGTGCTCCGG CTCCCCAAAT CGTCATCGAC
AGTCACGACG ACAAAGCCTG GCGCGACACG CTGTTAAAAG TGGCGGCCAT TTTATGTGAA
CGCCAGCCGG ATTCACCGCA GGGCTACCGT CTGCGCCGCC ATGCGCTTTG GCAGAACATC
ACCAGTACGC CCCAGGCGGA AAGCGATGGC CGTACTCCAC TGGCTGCGGT CTCCGCCGAT
ATGGTGGCAG ATTACCATGC TCAGCTCGGT AGTGCCGATA TGGCGCTGTG GCAGCAGGTG
GAGAAAAGCG TACTGCTGGC TCCTTACTGG CTGGATGGTC ACTGCCTTTC TGCACAGACG
GCGCTGCGTC TGGGTTACAA ACAGGTGGCA GACGCCATCC GCGATGAGGT CATCCGCTTC
CTTGAGCGTC TGCCCCAGCT TACCGGGCTG CTGTTTAATG ACCACACACC GTTTATCAGT
GAGCAGACGA AACAATGGCT GGCAGCTTCG CCCGACGCCA AAGTTGCACC GGTTGCGCAA
ATCGGTGAGG AATCGAAGGC AGCCAGAGCC TGTTTTGCTG AGCAGGGTCT GGAGGCGGCG
CTGCGATATC TGGACATGCT ACCCGAAGGC GATCCCCGCG ATCAGTTTCA CCGCCAGTAC
CTTGCCGCAC AGTTGACGGA AGAGGCGGGG CTGGTACAGC TTGCGCAGCA GCAGTACCGG
ATGTTGTTCA GGATGGGATT GCAGATGATG GTGGCAGACT GGGAGCCGTC CCTGCTTGAG
CAGCTAGAAC AAAAATTCAC GGCAGAACAA TAA
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| Protein sequence | MAMDLRDPNV WISHLLENLP EEKLASALKD DNPNWEYIDG EIVKLGSLAH SQLDIPELQR
RGLVILASES KDFRLLAHLL RTLQHAGDPH LALRLLALYV EHYWAVAAPQ NMAHKKRFAS
QVIKRFETGI EVFSQNAATA QRDALSGELA KLAQCWQSHN APELAQATDD LFALYQRAFN
RAAPAPVPTP AASGSSPQTT ATSESGVTQP SAPAPQIVID SHDDKAWRDT LLKVAAILCE
RQPDSPQGYR LRRHALWQNI TSTPQAESDG RTPLAAVSAD MVADYHAQLG SADMALWQQV
EKSVLLAPYW LDGHCLSAQT ALRLGYKQVA DAIRDEVIRF LERLPQLTGL LFNDHTPFIS
EQTKQWLAAS PDAKVAPVAQ IGEESKAARA CFAEQGLEAA LRYLDMLPEG DPRDQFHRQY
LAAQLTEEAG LVQLAQQQYR MLFRMGLQMM VADWEPSLLE QLEQKFTAEQ
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