| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0116 |
|---|
| Symbol | aceE |
|---|
| ID | 5589741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 124591 |
|---|
| End bp | 127254 |
|---|
| Gene Length | 2664 bp |
|---|
| Protein Length | 887 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923845 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_001461282 |
|---|
| Protein GI | 157155188 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00185117 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC GTTTCCCAAA TGACGTGGAT CCGATCGAAA CTCGCGACTG GCTCCAGGCG
ATCGAATCGG TCATCCGTGA AGAAGGTGTT GAGCGTGCTC AGTATCTGAT CGACCAACTG
CTTGCTGAAG CCCGCAAAGG CGGTGTAAAC GTAGCCGCAG GCACAGGTAT CAGCAACTAC
ATCAACACCA TCCCCGTTGA AGAACAACCG GAGTATCCGG GTAATCTGGA ACTGGAACGC
CGTATTCGTT CAGCTATTCG CTGGAACGCC ATCATGACGG TGCTGCGTGC GTCGAAAAAA
GATCTCGAAC TGGGCGGCCA CATGGCGTCC TTCCAGTCTT CCGCAACCAT TTATGATGTG
TGCTTTAACC ACTTCTTCCG TGCACGCAAC GAGCAGGATG GCGGCGACCT GGTTTACTTC
CAGGGCCACA TCTCCCCGGG CGTGTACGCT CGTGCTTTCC TGGAAGGTCG TCTGACTCAG
GAGCAGCTGG ATAACTTCCG TCAGGAAGTT CACGGCAATG GCCTCTCTTC CTATCCGCAC
CCGAAACTGA TGCCGGAATT CTGGCAGTTC CCGACCGTAT CTATGGGTCT GGGGCCGATT
GGTGCTATTT ACCAGGCTAA ATTCCTGAAA TATCTGGAAC ACCGTGGCCT GAAAGATACC
TCTAAACAGA CCGTTTACGC GTTCCTCGGC GACGGTGAAA TGGACGAACC GGAATCCAAA
GGTGCGATCA CCATCGCTAC CCGTGAAAAA CTGGATAACC TGGTCTTCGT TATCAACTGT
AACCTGCAGC GTCTTGACGG CCCGGTCACC GGTAACGGCA AGATCATCAA CGAACTGGAA
GGCATCTTCG AAGGTGCTGG CTGGAACGTG ATCAAAGTGA TGTGGGGTAG CCGTTGGGAT
GAACTGCTGC GTAAAGATAC CAGCGGTAAA CTGATCCAGC TGATGAACGA AACCGTTGAC
GGCGACTACC AGACCTTCAA ATCGAAAGAT GGTGCGTACG TTCGTGAACA CTTCTTCGGT
AAATATCCGG AAACCGCAGC ACTGGTTGCA GACTGGACTG ACGAACAGAT CTGGGCACTG
AACCGTGGTG GTCACGATCC GAAGAAAATC TACGCTGCAT TCAAGAAAGC GCAGGAAACC
AAAGGCAAAG CGACAGTAAT CCTTGCTCAT ACCATTAAAG GTTACGGCAT GGGCGACGCG
GCTGAAGGTA AAAACATCGC GCACCAGGTT AAGAAAATGA ACATGGACGG CGTGCGTCAC
ATCCGCGACC GTTTCAATGT GCCGGTGTCT GATGCAGATA TCGAAAAACT GCCGTACATC
ACCTTCCCGG AAGGTTCTGA AGAGCATACC TATCTGCACG CACAGCGTCA GAAACTGCAC
GGTTATCTGC CAAGCCGTCA GCCGAACTTC ACCGAGAAGC TTGAGCTGCC GAGCCTGCAA
GACTTCGGCG CGCTGCTGGA AGAGCAGAGC AAAGAGATCT CTACCACTAT CGCTTTCGTT
CGTGCCCTGA ACGTAATGCT GAAGAACAAG TCGATCAAAG ATCGTCTGGT ACCGATCATC
GCCGACGAAG CGCGTACTTT CGGTATGGAA GGTCTGTTCC GTCAGATTGG TATTTACAGC
CCGAACGGTC AGCAGTACAC CCCGCAGGAC CGCGAGCAGG TTGCTTACTA TAAAGAAGAC
GAGAAAGGTC AGATTCTGCA GGAAGGGATC AACGAGTTGG GCGCAGGTTG TTCCTGGCTG
GCAGCGGCGA CCTCTTACAG CACCAACAAT CTGCCGATGA TTCCGTTCTA CATCTATTAC
TCGATGTTCG GCTTCCAGCG TATCGGCGAT CTGTGCTGGG CGGCTGGCGA CCAGCAAGCG
CGTGGCTTCC TGATCGGCGG TACTTCCGGT CGTACCACCC TGAACGGTGA AGGTCTGCAG
CACGAAGATG GTCACAGCCA CATTCAGTCG CTGACTATCC CGAACTGTAT CTCTTACGAC
CCGGCTTACG CTTACGAAGT TGCTGTCATT ATGCATGACG GTCTGGAGCG TATGTACGGT
GAAAAACAAG AGAACGTTTA CTACTACATC ACTACGCTGA ACGAAAACTA CCACATGCCG
GCAATGCCGG AAGGTGCTGA GGAAGGTATC CGTAAAGGTA TCTACAAACT CGAAACCATT
GAAGGTAGCA AAGGTAAAGT TCAGCTGCTG GGCTCCGGTT CCATCCTGCG TCACGTCCGT
GAAGCGGCAG AGATCCTGGC GAAAGATTAC GGCGTAGGTT CTGACGTTTA TAGCGTGACC
TCCTTCACCG AACTGGCGCG AGATGGTCAG GATTGTGAAC GCTGGAACAT GCTGCACCCG
CTGGAAACTC CGCGCGTTCC GTATATCGCT CAGGTGATGA ACGACGCTCC GGCAGTGGCA
TCTACCGACT ATATGAAACT GTTCGCTGAG CAGGTCCGTA CTTACGTACC GGCTGACGAC
TACCGCGTAC TGGGTACTGA TGGCTTCGGT CGTTCCGACA GCCGTGAGAA CCTGCGTCAC
CACTTCGAAG TTGATGCTTC CTACGTGGTT GTAGCGGCGC TGGGCGAACT GGCTAAACGT
GGCGAAATCG ATAAGAAAGT GGTTGCTGAC GCAATCGCCA AATTCAACAT CGATGCAGAT
AAAGTTAACC CGCGTCTGGC GTAA
|
|---|
| Protein sequence | MSERFPNDVD PIETRDWLQA IESVIREEGV ERAQYLIDQL LAEARKGGVN VAAGTGISNY
INTIPVEEQP EYPGNLELER RIRSAIRWNA IMTVLRASKK DLELGGHMAS FQSSATIYDV
CFNHFFRARN EQDGGDLVYF QGHISPGVYA RAFLEGRLTQ EQLDNFRQEV HGNGLSSYPH
PKLMPEFWQF PTVSMGLGPI GAIYQAKFLK YLEHRGLKDT SKQTVYAFLG DGEMDEPESK
GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIINELE GIFEGAGWNV IKVMWGSRWD
ELLRKDTSGK LIQLMNETVD GDYQTFKSKD GAYVREHFFG KYPETAALVA DWTDEQIWAL
NRGGHDPKKI YAAFKKAQET KGKATVILAH TIKGYGMGDA AEGKNIAHQV KKMNMDGVRH
IRDRFNVPVS DADIEKLPYI TFPEGSEEHT YLHAQRQKLH GYLPSRQPNF TEKLELPSLQ
DFGALLEEQS KEISTTIAFV RALNVMLKNK SIKDRLVPII ADEARTFGME GLFRQIGIYS
PNGQQYTPQD REQVAYYKED EKGQILQEGI NELGAGCSWL AAATSYSTNN LPMIPFYIYY
SMFGFQRIGD LCWAAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD
PAYAYEVAVI MHDGLERMYG EKQENVYYYI TTLNENYHMP AMPEGAEEGI RKGIYKLETI
EGSKGKVQLL GSGSILRHVR EAAEILAKDY GVGSDVYSVT SFTELARDGQ DCERWNMLHP
LETPRVPYIA QVMNDAPAVA STDYMKLFAE QVRTYVPADD YRVLGTDGFG RSDSRENLRH
HFEVDASYVV VAALGELAKR GEIDKKVVAD AIAKFNIDAD KVNPRLA
|
|---|
| |