Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0090 |
Symbol | murD |
ID | 5586940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 98777 |
End bp | 100093 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640923821 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001461258 |
Protein GI | 157156086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0314248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATT ATCAGGGTAA AAATGTCGTC ATTATCGGCC TGGGCCTCAC CGGGCTTTCC TGCGTGGACT TTTTCCTCGC TCGCGGTGTG ACGCCGCGCG TTATGGATAC GCGTATGACA CCGCCTGGCC TGGATAAATT ACCCGAAGCC GTAGAACGCC ACACGGGCAG TCTGAATGAT GAATGGCTGA TGGCGGCAGA TCTGATTGTC GCCAGTCCCG GTATTGCACT GGCGCATCCA TCCTTAAGCG CTGCCGCTGA TGCCGGAATC GAAATCGTTG GCGATATCGA GCTGTTCTGT CGCGAAGCAC AAGCACCGAT TGTGGCGATT ACCGGTTCTA ACGGCAAAAG CACGGTCACC ACGCTAGTGG GTGAAATGGC GAAAGCGGCG GGGGTTAACG TTGGTGTGGG TGGCAATATT GGCCTGCCAG CGTTGATGCT GCTTGATGCT GAGTGCGAAC TGTACGTGCT GGAACTGTCG AGCTTCCAGC TGGAAACCAC TTCCAGCTTA CAGGCGGTGG CGGCGACCAT TCTGAACGTG ACTGAAGATC ATATGGACCG CTATCCGTTT GGTTTGCAGC AATACCGTGC GGCAAAATTG CGTATTTACG AAAATGCGAA AGTTTGTGTC GTCAATGCTG ATGATGCCTT AACAATGCCG ATTCGCGGTG CTGATGAACG CTGCGTCAGC TTTGGCGTCA ACATGGGTGA CTATCACCTG AATCATCAGC AGGGAGAAAC CTGGCTGCGA GTGAAAGGCG AGAAAGTGCT GAACGTGAAA GAGATGAAAC TTTCCGGGCA GCATAACTAC ACCAATGCGC TGGCAGCACT GGCACTGGCA GACGCAGCTG GTTTGCCGCG CGCCAGCAGC CTGAAAGCGT TAACCACCTT CGCCGGTCTG CCGCATCGCT TTGAAGTGGT GCTGGAGCAC AATGGCGTAC GCTGGATTAA CGATTCGAAA GCCACTAACG TCGGCAGTAC GGAAGCGGCG TTGAATGGCT TGCAGGTAGA CGGCACGCTG CATTTGTTGC TGGGCGGCGA TGGTAAATCG GCGGACTTCA GTCCACTGGC GCGCTATCTG AATGGCGACA ACGTGCGTTT GTACTGTTTT GGTCGTGACG GTGCGCAGCT GGCGGCGCTA CGCCCGGAAG TGGCAGAACA AACCGAAACT ATGGAACAGG CGATGCGCTT GCTGGCTCCG CGTGTTCAGC CGGGCGATAT GGTTCTGCTC TCCCCGGCCT GTGCCAGCCT TGATCAGTTC AAGAACTTTG AACAACGAGG CAATGAGTTT GCCCGTCTGG CGAAGGAGTT AGGTTGA
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Protein sequence | MADYQGKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRMT PPGLDKLPEA VERHTGSLND EWLMAADLIV ASPGIALAHP SLSAAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT TLVGEMAKAA GVNVGVGGNI GLPALMLLDA ECELYVLELS SFQLETTSSL QAVAATILNV TEDHMDRYPF GLQQYRAAKL RIYENAKVCV VNADDALTMP IRGADERCVS FGVNMGDYHL NHQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAAGLPRASS LKALTTFAGL PHRFEVVLEH NGVRWINDSK ATNVGSTEAA LNGLQVDGTL HLLLGGDGKS ADFSPLARYL NGDNVRLYCF GRDGAQLAAL RPEVAEQTET MEQAMRLLAP RVQPGDMVLL SPACASLDQF KNFEQRGNEF ARLAKELG
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