| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0039 |
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| Symbol | caiC |
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| ID | 5588976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 39465 |
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| End bp | 41033 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640923770 |
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| Product | putative crotonobetaine/carnitine-CoA ligase |
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| Protein accession | YP_001461207 |
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| Protein GI | 157155167 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAG GTGCAATGGA TATCATTGGC GGACAACATC TACGTCAAAT GTGGGACGAT
CTGGCGGACG TTTACGGTCA TAAAACGGCG CTGATTTGTG AATCCAGCGG CGGAGTCGTT
AACCGGTATA GTTATCTTGA GTTAAATCAG GAGATTAACC GCACGGCAAA CCTGTTTTAT
ACGCTGGGGA TTCGCAAAGG CGACAAGGTT GCACTACATC TCGACAACTG CCCGGAATTT
ATCTTTTGCT GGTTCGGGCT GGCAAAAATT GGCGCGATTA TGGTGCCGAT TAACGCCCGC
CTGTTACGCG AGGAAAGCGC GTGGATCCTG CAAAATAGCC AGGCGTGCCT GCTGGTGACC
AGTGCGCAAT TCTATCCTAT GTATCAACAG ATTCAGCAGG AAGATGCCAC TCAATTGCGG
CACATTTGCC TGACAGATGT GGCACTTCCC GCTGATGATG GCGTGAGTTC GTTTACTCAA
CTGAAAAATC AACAACCTGC CACCTTGTGC TATGCACCGC CGCTATCGAC TGACGATACG
GCGGAAATTC TCTTCACCTC CGGCACCACC TCCCGACCGA AAGGTGTGGT GATTACCCAT
TACAACCTGC GCTTCGCTGG ATATTACTCC GCCTGGCAGT GTGCACTGCG TGACGATGAC
GTCTACCTGA CGGTAATGCC TGCGTTTCAT ATCGATTGCC AGTGTACTGC GGCGATGGCG
GCGTTTTCTG CCGGGGCCAC CTTTGTGCTG GTCGAGAAAT ACAGCGCCCG CGCCTTCTGG
GGACAGGCGC AGAAGTACCG CGCCACCATT ACCGAATGTA TTCCGATGAT GATCCGTACG
TTGATGGTAC AGCCGCCTTC AGCGAACGAT CGGCAACACC GCCTGCGGGA AGTGATGTTT
TATCTCAACT TGTCGGAGCA GGAAAAAGAT GCATTTTGTG AACGCTTCGG CGTTCGCTTG
CTGACGTCTT ATGGGATGAC GGAAACCATT GTGGGCATTA TCGGCGATCG CCCTGGCGAT
AAACGACGCT GGCCGTCGAT TGGTCGGGCG GGGTTTTGCT ACGAAGCGGA GATCCGCGAC
GATCACAATC GCCCGCTCCC GGCAGGTGAG ATCGGTGAAA TCTGTATTAA AGGCGTACCA
GGGAAAACCA TCTTCAAAGA GTATTTTCTC AACCCGAAAG CCACTGCGAA AGTGCTGGAA
GCCGACGGCT GGCTACATAC CGGCGATACC GGATACTGCG ACGAAGAGGG CTTTTTTTAT
TTCGTCGATC GCCGCTGCAA TATGATCAAA CGCGGTGGCG AGAATGTCTC CTGCGTGGAG
CTGGAAAATA TCATCGCCAC CCATCCAAAA ATTCAGGATA TCGTGGTTGT GGGTATTAAA
GATTCGATTC GCGATGAAGC CATCAAAGCA TTTGTGGTGC TGAATGAAGG TGAAACATTG
AGCGAAGAGG AATTTTTCCG CTTCTGCGAA CAAAATATGG CGAAATTTAA AGTGCCCTCT
TATCTGGAGA TCAGAAAAGA TCTGCCACGT AATTGCTCGG GGAAAATAAT TAGAAAGAAT
CTGAAATAA
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| Protein sequence | MDRGAMDIIG GQHLRQMWDD LADVYGHKTA LICESSGGVV NRYSYLELNQ EINRTANLFY
TLGIRKGDKV ALHLDNCPEF IFCWFGLAKI GAIMVPINAR LLREESAWIL QNSQACLLVT
SAQFYPMYQQ IQQEDATQLR HICLTDVALP ADDGVSSFTQ LKNQQPATLC YAPPLSTDDT
AEILFTSGTT SRPKGVVITH YNLRFAGYYS AWQCALRDDD VYLTVMPAFH IDCQCTAAMA
AFSAGATFVL VEKYSARAFW GQAQKYRATI TECIPMMIRT LMVQPPSAND RQHRLREVMF
YLNLSEQEKD AFCERFGVRL LTSYGMTETI VGIIGDRPGD KRRWPSIGRA GFCYEAEIRD
DHNRPLPAGE IGEICIKGVP GKTIFKEYFL NPKATAKVLE ADGWLHTGDT GYCDEEGFFY
FVDRRCNMIK RGGENVSCVE LENIIATHPK IQDIVVVGIK DSIRDEAIKA FVVLNEGETL
SEEEFFRFCE QNMAKFKVPS YLEIRKDLPR NCSGKIIRKN LK
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