| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0019 |
|---|
| Symbol | |
|---|
| ID | 5588563 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 20560 |
|---|
| End bp | 21567 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 40% |
|---|
| IMG OID | 640745666 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000307086 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTT TATCTAAAAA TCTGGGAAAT GTATCATTAA GTGCGCTTTG GCGGAATTAC
TGGGGGCGAA GTGGAAATGC TAAAGATTAC CAACTCAGTT ACTCCAATAA CTGGCAACAC
ATTAGTTATA CTTTCTCTGC CAGCCAATCT TATGATGAAA ATAATAAAGA AGAGGAGCGT
TTTAATCTGT TTATCTCCAT TCCTTTCTAC TGGGGGGATG ATATTGCCAA AACACGTCAC
CAAATTAACT TATCGAATTC GACCTCATTT TCCAAAGATG GCTATTCCTC CAACAATACT
GGAATTACTG GCATAGCCGG TGAACATGAT CAGTTAAATT ATGGTATATA TGTTAATCAG
CAACAACAAA ATAATGATAC CTCGCTTGGT ACGAATTTAA GCTGGAGAAC TCCCATCGCC
ATAATAGATG GCAGCTATAG TCATTCTAAA AACGCCTGGC AAAGTGGTGG AAGTATTAGT
AGTGGATTAG TTGTCTGGCC CGGTGGTATT AATATCACTA ACCAGTTATC CGATACATTT
GCAATTCTGG ATGCGCCTGG GTTAGAAGGT GCACATATTA ATGGACAAAA ATACAATCGA
ACAAACAGCA AAGGCCAGGT TGTTTACGAC CTGATAATAC CTCATCGTGA AAACCATCTG
GTACTTGATA TAGCAAACAG TGAAAGTGAA ACAGAATTGC AGGGCAATCG TCAAATTATT
GCACCTTACC GTGGAGCAGT TTCTTATGTG CAGTTTACAA CTGACCAACG TAAGCCCTGG
TATATACAGG CACTGCGTCC CGATGGTTCG CCATTAACCT TTGGCTATGA CGTACTGGAT
CTCCAGGAAA ATAATATTGG AGTCGTTGGC CAGGGTAGTC GCCTTTTTAT TCGCGTAGAT
GAAATTCCCA CTGGAATAAA AGTTGCTCTC AATGATGAAC AGAACTTATT CTGTACTATT
ACTTTTCAAC ACGTTATCGA TGAAAACAAA ACATATATAT GCCAGTAA
|
|---|
| Protein sequence | |
|---|
| |