Gene EcHS_A4522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4522 
SymbolidnO 
ID5593985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4528716 
End bp4529480 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID640923618 
Productgluconate 5-dehydrogenase 
Protein accessionYP_001461059 
Protein GI157163741 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0305607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATC TATTTTCACT GGCAGGAAAA AATATCTTGA TTACCGGTTC AGCACAGGGC 
ATTGGCTTTT TACTGGCAAC CGGCCTGGGT AAATATGGCG CACAAATAAT TATTAATGAT
ATTACTGCCG AACGCGCAGA ACTTGCTGTA GAAAAACTCC ACCAGGAGGG TATTCAGGCC
GTTGCCGCAC CTTTTAATGT TACTCATAAA CATGAAATTG ATGCCGCCGT TGAACATATC
GAAAAGGACA TCGGCCCCAT TGATGTGCTG GTGAATAACG CCGGTATCCA GCGCCGTCAT
CCTTTTACTG AGTTCCCTGA ACAAGAGTGG AATGATGTGA TCGCAGTAAA CCAGACCGCC
GTGTTCCTGG TATCGCAAGC GGTAACTCGT CACATGGTTG AACGCAAGGC AGGTAAAGTT
ATTAATATTT GCTCGATGCA AAGCGAACTG GGACGTGACA CCATCACCCC TTATGCCGCA
TCGAAAGGGG CGGTAAAAAT GCTCACCCGC GGCATGTGCG TCGAGCTGGC GCGCCACAAT
ATTCAGGTCA ACGGTATTGC GCCGGGCTAT TTCAAAACAG AAATGACTAA AGCACTGGTT
GAGGACGAAG CCTTCACCGC CTGGTTGTGC AAACGGACCC CCGCCGCACG CTGGGGAGAT
CCGCAGGAAC TGATTGGTGC TGCGGTGTTC CTTTCTTCAA AAGCCTCTGA TTTCGTAAAC
GGCCACCTGT TGTTTGTTGA TGGCGGCATG TTAGTGGCTG TTTAA
 
Protein sequence
MNDLFSLAGK NILITGSAQG IGFLLATGLG KYGAQIIIND ITAERAELAV EKLHQEGIQA 
VAAPFNVTHK HEIDAAVEHI EKDIGPIDVL VNNAGIQRRH PFTEFPEQEW NDVIAVNQTA
VFLVSQAVTR HMVERKAGKV INICSMQSEL GRDTITPYAA SKGAVKMLTR GMCVELARHN
IQVNGIAPGY FKTEMTKALV EDEAFTAWLC KRTPAARWGD PQELIGAAVF LSSKASDFVN
GHLLFVDGGM LVAV