Gene EcHS_A4424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4424 
Symbol 
ID5592193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4434011 
End bp4434742 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID640923522 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_001460963 
Protein GI157163645 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA TGATTTACGG CATCCACGCA GTGCAGGCCC TGCTGGAGCG CGCCCCTGAA 
CGTTTTCAGG AAGTCTTTAT TTTAAAAGGC CGTGAAGATA AACGTCTGTT ACCGCTGATT
CACGCCCTTG AGTCTCAGGG CGTGGTTATC CAGTTGGCAA ACCGCCAATA TCTCGACGAG
AAAAGCGACG GTGCCGTGCA TCAGGGCATT ATCGCCCGCG TGAAGCCAGG ACGTCAGTAT
CAGGAAAACG ATCTGCCGGA TCTGATCGCT TCGCTCGATC AACCGTTCCT GCTGATCCTC
GACGGTGTAA CCGATCCGCA CAACCTCGGC GCGTGCCTGC GTAGCGCGGA CGCTGCTGGC
GTTCACGCGG TGATTGTGCC GAAAGATCGC TCCGCACAGC TCAACGCTAC GGCGAAAAAA
GTAGCCTGCG GCGCGGCAGA AAGCGTTCCA CTGATTCGGG TGACTAACCT TGCGCGCACC
ATGCGTATGT TGCAGGAAGA GAATATCTGG ATCGTCGGTA CGGCAGGCGA GGCGGATCAT
ACACTCTATC AGAGCAAAAT GACCGGACGC CTGGCGCTGG TGATGGGCGC GGAAGGTGAA
GGTATGCGTC GCCTGACCCG TGAACATTGC GATGAGTTGA TCAGCATCCC AATGGCAGGA
AGTGTTTCTT CCCTGAACGT TTCGGTTGCA ACCGGAATTT GCTTATTTGA AGCGGTTCGT
CAGCGCAGCT AG
 
Protein sequence
MSEMIYGIHA VQALLERAPE RFQEVFILKG REDKRLLPLI HALESQGVVI QLANRQYLDE 
KSDGAVHQGI IARVKPGRQY QENDLPDLIA SLDQPFLLIL DGVTDPHNLG ACLRSADAAG
VHAVIVPKDR SAQLNATAKK VACGAAESVP LIRVTNLART MRMLQEENIW IVGTAGEADH
TLYQSKMTGR LALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGICLFEAVR
QRS