| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4401 |
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| Symbol | |
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| ID | 5594883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 4410788 |
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| End bp | 4414111 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640923499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001460943 |
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| Protein GI | 157163625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.199255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCTGA TTATCACTTT TCTGATGGCC TGGTGCCTCA GTTGGGGGGC GTACGCCGCG
ACGGCCCCCG ATAGCAAACA AATCACTCAG GAACTGGAGC AGGCAAAAGC GGCGAAACCC
GCACAGCCGG AAGTCGTAGA GGCGCTCCAG TCTGCCTTAA ATGCGCTTGA GGAACGAAAA
GGTTCCCTTG AGCGCATCAA ACAATATCAG CAAGTTATCG ATAATTATCC GAAACTCTCC
GCTACTCTGC GCGCACAATT AAACAACATG CGTGACGAGC CGCGCAGCGT GTCGCCGGGA
ATGTCTACCG ACGCGCTGAA TCAGGAAATT CTCCAGGTCA GCAGCCAGTT GCTGGATAAA
AGCCGTCAGG CCCAGCAAGA GCAGGAGCGC GCCCGCGAGA TTGCCGATTC GCTGAATCAA
CTGCCGCAAC AGCAAACCGA CGCCCGCCGT CAGTTAAATG AGATCGAGCG CCGCCTGGGA
ACGCTTACTG GCAATACCCC GCTCAATCAG GCACAAAATT TCGCGTTGCA GTCTGACTCC
GCACGCCTGA AAGCGCTCGT TGATGAACTG GAACTGGCGC AGCTGTCTGC CAATAACCGT
CAGGAATTAG CGCGCTTACG CTCAGAGCTG GCGGAAAAAG AGAGCCAGCA ACTGGATGCG
TATTTGCAGG CCTTACGTAA TCAGTTGAAC AGCCAACGTC AGCTTGAGGC GGAGCGGGCG
CTGGAAAGTA CCGAATTGCT GGCAGAAAAC AGCGCCGATT TGCCGAAAGA CATCGTCGCG
CAATTCAAAA TTAACCGCGA ACTATCGGCG GCACTGAATC AACAGGCGCA GCGGATGGAT
CTCGTTGCCT CGCAACAGCG CCAGGCCACC AGCCAGACGT TACAGGTTCG GCAGGCGCTG
AATACGCTGC GTGAACAGTC GCAATGGCTG GGATCGTCCA ACCTGCTCGG CGAAGCGTTG
CGGGCGCAGG TGGCACGGCT GCCGGAAATG CCGAAACCAC AACAGCTTGA TACCGAAATG
GCGCAGTTGC GTGTGCAACG GTTACGTTAT GAGGATCTGC TTAATAAACA GCCGCTGCTA
CGGCAAATTC ATCAGGCCGA CGGTCAGCCG CTGACCGCCG AGCAAAACCG TATTCTGGAA
GCACAGCTAC GCACTCAGCG TGAGTTGCTG AACTCATTGT TGCAGGGTGG CGACACGCTA
CTGCTGGAAC TGACCAAGCT GAAAGTCTCC AACGGGCAAC TTGAGGATGC GCTGAAAGAG
GTGAATGAAG CGACGCATCG CTATCTGTTC TGGACCTCTG ACGTGCGCCC GATGACCATC
GCCTGGCCAC TGGAAATCGC CCAGGATCTG CGTCGTCTCA TTTCGCTGGA CACCTTCAGT
CAGTTGGGCA AAGCCAGTGT GATGATGCTG ACCAGCAAAG AGACGATTTT GCCGCTGTTT
GGCGCGTTGA TTCTGGTCGG TTGCAGTATT TACTCGCGCC GCTATTTCAC CCGTTTTCTT
GAACGTTCGG CGGCGAAAGT CGGCAAAGTG ACTCAGGATC ACTTCTGGCT GACGTTGCGC
ACTCTTTTCT GGTCGATTCT CGTCGCGTCA CCGCTGCCGG TGCTGTGGAT GACGCTGGGT
TACGGCTTGC GCGAGGCGTG GCCTTATCCG CTGGCGGTCG CGATTGGCGA TGGCGTAACG
GCCACCGTGC CGCTGCTGTG GGTAGTGATG ATTTGCGCCA CCTTTGCCCG CCCGAACGGC
TTGTTTATCG CTCATTTTGG CTGGCCGCGC GAACGTGTTT CCCGTGGGAT GCGCTACTAC
CTGATGAGCA TCGGGCTTAT TGTGCCGCTG ATTATGGCGC TGATGATGTT CGATAACCTC
GACGACCGTG AATTCTCCGG TTCGCTGGGA CGGCTTTGCT TTATCCTCAT TTGCGGTGCG
CTGGCGGTGG TCACCCTCAG CCTGAAAAAG GCCGGGATCC CGCTGTACCT CAACAAAGAG
GGCAGCGGCG ACAACATTAC CAACCATATG CTGTGGAACA TGATGATTGG CGCACCACTG
GTTGCCATTC TGGCGTCAGC GGTGGGTTAT CTGGCAACGG CGCAGGCACT GTTAGCGAGG
CTTGAAACCT CGGTTGCCAT CTGGTTCCTG CTACTGGTGG TTTATCACGT TATCCGCCGC
TGGATGCTGA TCCAGCGTCG CAGGCTGGCG TTTGACCGGG CGAAGCATCG CCGGGCAGAG
ATGTTAGCGC AACGCGCGCG TGGCGAAGAG GAAGCGCATC ATCACAGTAG CCCGGAAGGG
GCAATTGAAG TCGATGAAAG CGAAGTCGAT CTCGATGCCA TCAGTGCGCA ATCCTTGCGG
CTGGTGCGCT CAATTTTGAT GTTGATCGCC CTGCTTTCTG TCATTGTGCT GTGGTCAGAA
ATCCATTCCG CTTTCGGCTT CCTCGAAAAT ATTTCGCTGT GGGATGTCAC CTCCACGGTA
CAGGGCGTAG AAAGTCTGGA GCCAATTACC CTCGGTGCGG TGCTGATTGC CATTCTGGTG
TTTATCATCA CCACGCAGCT GGTGCGCAAC CTGCCCGCGC TGCTGGAACT GGCGATTTTG
CAGCACCTGG ATTTAACGCC GGGTACGGGC TACGCCATCA CCACCATCAC CAAATATCTG
CTGATGCTGA TTGGCGGGCT GGTCGGCTTC TCGATGATTG GTATTGAGTG GTCGAAATTG
CAGTGGCTGG TTGCCGCGCT CGGTGTTGGT CTCGGTTTTG GTTTGCAGGA GATTTTCGCC
AACTTTATCT CTGGCCTGAT TATCCTGTTC GAAAAACCGA TTCGCATTGG CGATACGGTA
ACGATCCGCG ATCTTACCGG TAGCGTGACG AAAATTAACA CCCGCGCCAC CACCATCAGC
GACTGGGACC GTAAAGAGAT AATCGTGCCG AACAAGGCGT TTATTACCGA GCAGTTTATC
AACTGGTCGC TCTCTGACTC GGTCACGCGC GTGGTGTTGA CGATACCGGC CCCTGCCGAT
GCCAATAGCG AAGAAGTGAC GGAAATCCTG CTCACCGCAG CGCGTCGCTG CTCGCTGGTG
ATCGACAACC CGGCACCGGA AGTCTTCCTG GTGGATCTGC AACAGGGGAT TCAGATTTTC
GAGCTGCGTA TTTACGCCGC TGAGATGGGT CACCGTATGC CGCTACGCCA TGAGATCCAC
CAGCTGATTC TGGCAGGCTT CCACGCCCAC GGTATCGATA TGCCATTCCC GCCCTTCCAG
ATGCGTCTGG AAAGCCTCAA CGGTAAGCAA ACGGGGAGAA CATTAACTTC TGCGGGCAAA
GGTCGTCAGG CGGGAAGTTT GTAA
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| Protein sequence | MRLIITFLMA WCLSWGAYAA TAPDSKQITQ ELEQAKAAKP AQPEVVEALQ SALNALEERK
GSLERIKQYQ QVIDNYPKLS ATLRAQLNNM RDEPRSVSPG MSTDALNQEI LQVSSQLLDK
SRQAQQEQER AREIADSLNQ LPQQQTDARR QLNEIERRLG TLTGNTPLNQ AQNFALQSDS
ARLKALVDEL ELAQLSANNR QELARLRSEL AEKESQQLDA YLQALRNQLN SQRQLEAERA
LESTELLAEN SADLPKDIVA QFKINRELSA ALNQQAQRMD LVASQQRQAT SQTLQVRQAL
NTLREQSQWL GSSNLLGEAL RAQVARLPEM PKPQQLDTEM AQLRVQRLRY EDLLNKQPLL
RQIHQADGQP LTAEQNRILE AQLRTQRELL NSLLQGGDTL LLELTKLKVS NGQLEDALKE
VNEATHRYLF WTSDVRPMTI AWPLEIAQDL RRLISLDTFS QLGKASVMML TSKETILPLF
GALILVGCSI YSRRYFTRFL ERSAAKVGKV TQDHFWLTLR TLFWSILVAS PLPVLWMTLG
YGLREAWPYP LAVAIGDGVT ATVPLLWVVM ICATFARPNG LFIAHFGWPR ERVSRGMRYY
LMSIGLIVPL IMALMMFDNL DDREFSGSLG RLCFILICGA LAVVTLSLKK AGIPLYLNKE
GSGDNITNHM LWNMMIGAPL VAILASAVGY LATAQALLAR LETSVAIWFL LLVVYHVIRR
WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EAHHHSSPEG AIEVDESEVD LDAISAQSLR
LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
FIITTQLVRN LPALLELAIL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL
QWLVAALGVG LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS
DWDRKEIIVP NKAFITEQFI NWSLSDSVTR VVLTIPAPAD ANSEEVTEIL LTAARRCSLV
IDNPAPEVFL VDLQQGIQIF ELRIYAAEMG HRMPLRHEIH QLILAGFHAH GIDMPFPPFQ
MRLESLNGKQ TGRTLTSAGK GRQAGSL
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