| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4294 |
|---|
| Symbol | tyrB |
|---|
| ID | 5593447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 4298858 |
|---|
| End bp | 4300051 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923396 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_001460841 |
|---|
| Protein GI | 157163523 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.820451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCAAA AAGTTGACGC CTACGCTGGC GACCCGATTC TTACGCTTAT GGAGCGTTTT
AAAGAAGACC CTCGCAGCGA CAAAGTGAAT TTAAGTATCG GTCTGTACTA CAACGAAGAC
GGAATTATTC CACAACTGAA AGCCGTGGCG GAGGCGGAAG CGCGCCTGAA TGCGCAGCCT
CATGGCGCTT CGCTTTATTT ACCGATGGAA GGGCTTAACA GCTATCGCCA TGCCATTGCG
CCGCTGCTGT TTGGTGCGGA CCATCCGGTA CTGAAACAAC AGCGCGTAGC AACCATTCAA
ACCCTTGGCG GCTCCGGGGC ATTGAAAGTG GGCGCGGATT TCCTGAAACG CTACTTCCCG
GAATCAGGCG TCTGGGTCAG CGATCCTACC TGGGAAAACC ACATAGCAAT ATTCGCCGGG
GCTGGATTCG AAGTGAGTAC TTACCCCTGG TATGACGAAG CGACTAACGG CGTGCGCTTT
AATGACCTGT TGGCGACGCT GAAAACATTA CCTGCCCGCA GTATTGTGTT GCTGCATCCA
TGTTGCCACA ACCCAACGGG TGCCGATCTC ACTAATGACC AGTGGGATGC GGTGATTGAA
ATTCTCAAAG CCCGCGAGCT TATTCCATTC CTCGATATTG CCTATCAAGG ATTTGGTGCC
GGTATGGAAG AGGATGCCTA CGCTATTCGC GCCATTGCCA GCGCTGGATT ACCCGCTCTG
GTGAGCAATT CGTTCTCGAA AATTTTCTCC CTTTACGGCG AGCGCGTCGG CGGACTTTCT
GTTATGTGTG AAGATGCCGA AGCCGCTGGC CGCGTACTGG GGCAATTGAA AGCAACAGTT
CGCCGCAACT ACTCCAGCCC GCCGAATTTT GGTGCGCAGG TGGTGGCTGC AGTGCTGAAT
GACGAGGCAT TGAAAGCCAG CTGGCTGGCG GAAGTAGAAG AGATGCGTAC TCGCATTCTG
GCAATGCGTC AGGAACTGGT GAAGGTATTA AGCACAGAGA TGCCAGAACG CAATTTCGAT
TATCTGCTTA ATCAGCGCGG CATGTTCAGT TATACCGGTT TAAGTGCCGC TCAGGTTGAC
CGACTACGTG AAGAATTTGG TGTCTATCTC ATCGCCAGCG GTCGCATGTG TGTCGCCGGG
TTAAATACGG CAAATGTACA ACGTGTGGCA AAGGCGTTTG CTGCGGTGAT GTAA
|
|---|
| Protein sequence | MFQKVDAYAG DPILTLMERF KEDPRSDKVN LSIGLYYNED GIIPQLKAVA EAEARLNAQP
HGASLYLPME GLNSYRHAIA PLLFGADHPV LKQQRVATIQ TLGGSGALKV GADFLKRYFP
ESGVWVSDPT WENHIAIFAG AGFEVSTYPW YDEATNGVRF NDLLATLKTL PARSIVLLHP
CCHNPTGADL TNDQWDAVIE ILKARELIPF LDIAYQGFGA GMEEDAYAIR AIASAGLPAL
VSNSFSKIFS LYGERVGGLS VMCEDAEAAG RVLGQLKATV RRNYSSPPNF GAQVVAAVLN
DEALKASWLA EVEEMRTRIL AMRQELVKVL STEMPERNFD YLLNQRGMFS YTGLSAAQVD
RLREEFGVYL IASGRMCVAG LNTANVQRVA KAFAAVM
|
|---|
| |