Gene EcHS_A4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4232 
Symbolnfi 
ID5593122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp4228372 
End bp4229043 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID640923336 
Productendonuclease V 
Protein accessionYP_001460785 
Protein GI157163467 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG CGTCATTACG CGCTCAACAA ATCGAACTGG CTTCTTCTGT GATCCGCGAG 
GATCGACTCG ATAAAGATCC ACCGGATCTG ATCGCCGGAG CCGATGTCGG GTTTGAGCAG 
GGCGGAGAAG TGACGCGAGC GGCGATGGTG CTGCTGAAAT ATCCCTCGCT TGAGCTGGTG 
GAGTATAAAG TTGCCCGCAT CGCCACCACC ATGCCTTACA TTCCAGGTTT TCTTTCCTTC 
CGCGAATATC CTGCGCTGCT GGCAGCGTGG GAGATGCTGT CGCAAAAGCC GGATTTAGTG 
TTTGTCGATG GTCATGGGAT CTCGCATCCT CGCCGTCTTG GCGTCGCCAG CCATTTTGGT 
TTGATGGTGG ATGTGCCAAC GATCGGCGTG GCGAAAAAAC GGCTCTGCGG TAAATTCGAA 
CCGCTCTCCA GCGAACCGGG CGCGCTGGCC CCACTGATGG ATAAAGGCGA GCAGCTGGCC 
TGGGTCTGGC GCAGCAAAGC GCGCTGTAAC CCGTTGTTTA TCGCTACCGG CCATCGGGTC 
AGCGTGGACA GCGCGCTGGC GTGGGTACAA CGCTGCATGA AAGGCTATCG TCTGCCGGAG 
CCAACGCGCT GGGCGGACGC GGTGGCCTCG GAACGTCCGG CGTTCGTGCG CTATACAGCA 
AATCAGCCCT AA
 
Protein sequence
MDLASLRAQQ IELASSVIRE DRLDKDPPDL IAGADVGFEQ GGEVTRAAMV LLKYPSLELV 
EYKVARIATT MPYIPGFLSF REYPALLAAW EMLSQKPDLV FVDGHGISHP RRLGVASHFG 
LMVDVPTIGV AKKRLCGKFE PLSSEPGALA PLMDKGEQLA WVWRSKARCN PLFIATGHRV 
SVDSALAWVQ RCMKGYRLPE PTRWADAVAS ERPAFVRYTA NQP