Gene EcHS_A4200 details

Gene Information

• Locus tag: EcHS_A4200
• Symbol: btuB
• ID: 5593602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4193305
• End bp: 4195149
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640923303
• Product: vitamin B12/cobalamin outer membrane transporter
• Protein accession: YP_001460761
• Protein GI: 157163443
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0000101627
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAA AAGCTTCGCT GCTGACGGCG TGTTCTGTCA CAGCCTTTTC CGCTTGGGCA 
CAGGATACCA GCCCGGATAC TCTCGTCGTT ACTGCTAACC GTTTTGAACA GCCGCGCAGC 
ACTGTGCTTG CACCAACCAC CGTTGTGACC CGTCAGGATA TCGACCGCTG GCAGTCGACC 
TCGGTCAATG ATGTGCTGCG CCGTCTTCCG GGCGTCGATA TCACCCAAAA CGGCGGTTCA 
GGTCAGCTCT CATCTATTTT TATTCGCGGT ACAAATGCCA GTCATGTGTT GGTGTTAATT 
GATGGCGTAC GCCTGAATCT GGCGGGGGTG AGTGGTTCTG CCGACCTTAG CCAGTTCCCT 
ATTGCGCTTG TCCAGCGTGT TGAATATATC CGTGGGCCGC GCTCCGCTGT TTATGGTTCC 
GATGCAATAG GCGGGGTGGT GAATATCATC ACGACGCGCG ATGAACCCGG AACGGAAATT 
TCAGCAGGGT GGGGAAGCAA TAGTTATCAG AACTATGATG TCTCTACGCA GCAACAACTG 
GGGGATAAGA CACGGGTAAC GCTGTTGGGC GATTATGCCC ATACTCATGG TTATGATGTT 
GTTGCCTATG GTAATACCGG AACGCAAGCG CAGACAGATA ACGATGGTTT TTTAAGTAAA 
ACGCTTTATG GCGCGCTGGA GCATAACTTT ACTGATGCCT GGAGCGGCTT TGTGCGCGGC 
TATGGCTATG ATAACCGTAC CAATTATGAC GCGTATTATT CTCCCGGTTC ACCGTTGCTC 
GATACCCGTA AACTCTATAG CCAAAGTTGG GACGCCGGGC TGCGCTATAA CGGCGAACTG 
ATTAAATCAC AACTCATTAC CAGCTATAGC CATAGCAAAG ATTACAACTA CGATCCCCAT 
TTTGGTCGTT ATGATTCGTC GGCGACGCTC GATGAGATGA AGCAATACAC CGTCCAGTGG 
GCAAACAATG TCATCGTTGG TCACGGTAGT ATTGGTGCGG GTGTCGACTG GCAGAAACAG 
ACTACGACGC CGGGTACAGG TTATGTTGAG AATGGATATG ATCAACGTAA TACCGGCATC 
TATCTGACCG GGCTGCAACA AGTCGGCGAT TTTACCTTTG AAGGCGCAGC ACGCAGTGAC 
GATAACTCAC AGTTTGGTCG TCATGGAACC TGGCAAACCA GCGCCGGTTG GGAATTCATC 
GAAGGTTATC GCTTCATTGC TTCCTACGGG ACATCTTATA AGGCACCAAA TCTGGGGCAA 
CTGTATGGCT TCTACGGAAA TCCGAATCTG GACCCGGAGA AAAGCAAACA GTGGGAAGGC 
GCGTTTGAAG GCTTAACCGC TGGGGTGAAC TGGCGTATTT CCGGATATCG TAACGATGTC 
AGTGACTTGA TCGATTATGA TGATCACACC CTGAAATATT ACAACGAAGG GAAAGCGCGG 
ATTAAGGGCG TCGAGGCGAC CGCCAATTTT GATACCGGAC CACTGACGCA TACTGTGAGT 
TATGATTATG TCGATGCGCG CAATGCGATT ACCGACACGC CGTTGTTACG CCGTGCTAAA 
CAGCAGGTGA AATACCAGCT CGACTGGCAG TTGTATGACT TCGACTGGGG TATTACTTAT 
CAGTATTTAG GCACTCGCTA TGATAAGGAT TACTCATCTT ATCCTTATCA AACCGTTAAA 
ATGGGCGGTG TGAGCTTGTG GGATCTTGCG GTTGCGTATC CGGTCACCTC TCACCTGACA 
GTTCGTGGTA AAATAGCCAA CCTGTTCGAC AAAGATTATG AGACAGTCTA TGGCTACCAA 
ACTGCAGGAC GGGAATACAC CTTGTCTGGC AGCTACACCT TCTGA 

 

Protein sequence

MIKKASLLTA CSVTAFSAWA QDTSPDTLVV TANRFEQPRS TVLAPTTVVT RQDIDRWQST 
SVNDVLRRLP GVDITQNGGS GQLSSIFIRG TNASHVLVLI DGVRLNLAGV SGSADLSQFP 
IALVQRVEYI RGPRSAVYGS DAIGGVVNII TTRDEPGTEI SAGWGSNSYQ NYDVSTQQQL 
GDKTRVTLLG DYAHTHGYDV VAYGNTGTQA QTDNDGFLSK TLYGALEHNF TDAWSGFVRG 
YGYDNRTNYD AYYSPGSPLL DTRKLYSQSW DAGLRYNGEL IKSQLITSYS HSKDYNYDPH 
FGRYDSSATL DEMKQYTVQW ANNVIVGHGS IGAGVDWQKQ TTTPGTGYVE NGYDQRNTGI 
YLTGLQQVGD FTFEGAARSD DNSQFGRHGT WQTSAGWEFI EGYRFIASYG TSYKAPNLGQ 
LYGFYGNPNL DPEKSKQWEG AFEGLTAGVN WRISGYRNDV SDLIDYDDHT LKYYNEGKAR 
IKGVEATANF DTGPLTHTVS YDYVDARNAI TDTPLLRRAK QQVKYQLDWQ LYDFDWGITY 
QYLGTRYDKD YSSYPYQTVK MGGVSLWDLA VAYPVTSHLT VRGKIANLFD KDYETVYGYQ 
TAGREYTLSG SYTF