| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4069 |
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| Symbol | fadB |
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| ID | 5595361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 4059042 |
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| End bp | 4061231 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640923172 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001460638 |
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| Protein GI | 157163320 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0033982 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACA AAGGCGACAC CCTGTACCTT GACTGGCTGG AAGATGGCAT TGCCGAACTG
GTATTTGATG CCCCAGGTTC AGTTAATAAA CTCGACACTG CGACCGTCGC CAGCCTCGGC
GAGGCCATCG GCGTGCTGGA ACAGCAATCA GATCTAAAAG GGCTGCTGCT ACGTTCGAAC
AAAGCAGCCT TTATCGTCGG TGCTGATATC ACCGAATTTT TGTCCCTGTT CCTCGTTCCT
GAAGAACAGT TAAGTCAGTG GCTGCACTTT GCCAATAGCG TGTTTAATCG CCTGGAAGAT
CTGCCGGTGC CGACCATTGC TGCCGTCAAT GGCTATGCGC TGGGCGGTGG CTGCGAATGC
GTGCTGGCGA CCGATTATCG TCTGGCGACG CCGGATCTGC GCATCGGTCT GCCGGAAACC
AAACTGGGCA TCATGCCGGG CTTTGGCGGT TCTGTACGTA TGCCACGTAT GCTGGGCGCT
GACAGTGCGC TGGAAATCAT TGCCGCCGGT AAAGATGTCG GCGCGGATCA GGCGCTGAAA
ATCGGTCTGG TGGATGGCGT AGTCAAAGCA GAAAAACTGA TTGAAGGGGC GATGGCGATT
TTACGCCAGG CCATTAACGG CGACCTCGAC TGGAAAGCGA AACGTCAGCC GAAGCTGGAA
CCGCTAAAAC TGAGCAAGAT TGAAGCCACC ATGAGCTTCA CCATCGCTAA AGGGATGGTC
GCACAAACGG CGGGGAAACA TTATCCGGCC CCCATCACCG CAGTAAAAAC CATTGAAGCT
GCGGCCCGTT TTGGTCGTGA AGAAGCCCTA AACCTGGAAA ACAAAAGTTT TGTCCCGCTG
GCGCATACCA ACGAAGCTCG CGCACTGGTC GGCATATTCC TTAACGATCA ATATGTAAAA
GGCAAAGCGA AGAAACTCAC CAAAGACGTT GAAACCCCGA AACAGGCCGC TGTGCTGGGC
GCAGGCATTA TGGGCGGCGG CATCGCTTAC CAGTCTGCGT GGAAAGGCGT GCCGGTTGTC
ATGAAAGATA TCAACGACAA GTCGTTAACC CTCGGCATGA CCGAAGCCGC GAAACTGCTG
AACAAGCAGC TTGAGCGCGG CAAGATCGAT GGTCTGAAAC TGGCTGGCGT GATCTCCACA
ATCCACCCAA CGCTCGACTA CGCCGGGTTT GACCGCGTGG ATGTTGTGGT AGAAGCGGTT
GTTGAAAACC CGAAAGTGAA AAAAGCCGTA CTGGCAGAAA CCGAACAAAA AGTACGCCAG
GATACCGTGC TGGCGTCTAA CACTTCAACC ATTCCTATCA GCGAACTGGC CAACGCGCTG
GAACGTCCGG AAAACTTCTG CGGGATGCAC TTCTTTAACC CGGTGCACCG GATGCCGTTG
GTAGAAATTA TTCGCGGCGA GAAAAGCTCC GACGAAACCA TCGCGAAAGT CGTCGCATGG
GCGAGCAAGA TGGGCAAGAC GCCGATTGTG GTCAACGACT GCCCCGGCTT CTTCGTTAAC
CGTGTACTGT TCCCCTACTT CGCCGGATTC AGCCAGTTGC TGCGCGACGG CGCAGACTTC
CGCAAGATCG ACAAAGTGAT GGAAAAACAG TTTGGCTGGC CGATGGGTCC GGCATACCTG
CTGGACGTTG TGGGGATTGA TACCGCGCAT CACGCTCAGG CTGTCATGGC AGCAGGCTTC
CCGCAGCGGA TGCAGAAAGA TTACCGCGAT GCCATCGACG CGCTGTTTGA TGCCAACCGC
TTTGGTCAGA AGAACGGCCT CGGTTTCTGG CGTTATAAAG AAGACAGCAA AGGTAAGCCG
AAGAAAGAAG AAGACGCCGC CGTTGAAGAC CTGCTGGCAG AAGTGAGCCA GCCGAAGCGC
GATTTCAGCG AAGAGGAGAT TATCGCCCGC ATGATGATCC CGATGGTCAA CGAAGTGGTG
CGCTGTCTGG AGGAAGGCAT TATCGCCACT CCGGCGGAAG CGGATATGGC GCTGGTCTAC
GGCCTGGGCT TCCCTCCGTT CCACGGCGGC GCGTTCCGCT GGCTGGACAC CCTCGGTAGC
GCAAAATACC TCGATATGGC ACAGCAATAT CAGCACCTCG GCCCGCTGTA TGAAGTGCCG
GAAGGTCTGC GTAATAAAGC GCGTCATAAC GAACCGTACT ATCCTCCGGT TGAGCCAGCC
CGTCCGGTTG GCGACCTGAA AACGGCTTAA
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| Protein sequence | MLYKGDTLYL DWLEDGIAEL VFDAPGSVNK LDTATVASLG EAIGVLEQQS DLKGLLLRSN
KAAFIVGADI TEFLSLFLVP EEQLSQWLHF ANSVFNRLED LPVPTIAAVN GYALGGGCEC
VLATDYRLAT PDLRIGLPET KLGIMPGFGG SVRMPRMLGA DSALEIIAAG KDVGADQALK
IGLVDGVVKA EKLIEGAMAI LRQAINGDLD WKAKRQPKLE PLKLSKIEAT MSFTIAKGMV
AQTAGKHYPA PITAVKTIEA AARFGREEAL NLENKSFVPL AHTNEARALV GIFLNDQYVK
GKAKKLTKDV ETPKQAAVLG AGIMGGGIAY QSAWKGVPVV MKDINDKSLT LGMTEAAKLL
NKQLERGKID GLKLAGVIST IHPTLDYAGF DRVDVVVEAV VENPKVKKAV LAETEQKVRQ
DTVLASNTST IPISELANAL ERPENFCGMH FFNPVHRMPL VEIIRGEKSS DETIAKVVAW
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF SQLLRDGADF RKIDKVMEKQ FGWPMGPAYL
LDVVGIDTAH HAQAVMAAGF PQRMQKDYRD AIDALFDANR FGQKNGLGFW RYKEDSKGKP
KKEEDAAVED LLAEVSQPKR DFSEEEIIAR MMIPMVNEVV RCLEEGIIAT PAEADMALVY
GLGFPPFHGG AFRWLDTLGS AKYLDMAQQY QHLGPLYEVP EGLRNKARHN EPYYPPVEPA
RPVGDLKTA
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