Gene EcHS_A4048 details

Gene Information

• Locus tag: EcHS_A4048
• Symbol: rhtB
• ID: 5595349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 4038916
• End bp: 4039536
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640923152
• Product: homoserine/homoserine lactone efflux protein
• Protein accession: YP_001460618
• Protein GI: 157163300
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 69
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTAG AATGGTGGTT TGCCTACCTG CTGACATCGA TCATTTTAAG CCTGTCGCCA 
GGCTCTGGTG CAATCAACAC TATGACCACC TCGCTCAACC ACGGTTATCG CGGCGCGGTG 
GCGTCTATTG CTGGGCTTCA GACCGGACTG GCGATTCATA TTGTGCTGGT TGGCGTGGGG 
TTGGGGACGC TATTTTCCCG CTCAGTGATT GCGTTTGAAG TGTTGAAGTG GGCAGGCGCG 
GCTTACTTGA TTTGGCTGGG AATCCAGCAG TGGCGCGCCG CTGGTGCAAT TGACCTTAAA 
TCGCTGGCCT CTACTCAATC GCGTCGACAT TTGTTCCAGC GCGCAGTTTT TGTGAATCTC 
ACCAATCCCA AAAGTATTGT GTTTCTGGCG GCGCTATTTC CGCAATTCAT CATGCCACAG 
CAGCCGCAAC TGATGCAGTA TATCGTGCTC GGCGTCACCA CTATTGTAGT CGATATTATT 
GTGATGATCG GTTACGCCAC CCTTGCTCAA CGGATTGCTC TATGGATTAA AGGACCAAAG 
CAGATGAAGG CGCTGAATAA GATTTTCGGC TCGTTGTTTA TGCTGGTGGG AGCGCTGTTA 
GCATCGGCGA GGCATGCGTG A 

 

Protein sequence

MTLEWWFAYL LTSIILSLSP GSGAINTMTT SLNHGYRGAV ASIAGLQTGL AIHIVLVGVG 
LGTLFSRSVI AFEVLKWAGA AYLIWLGIQQ WRAAGAIDLK SLASTQSRRH LFQRAVFVNL 
TNPKSIVFLA ALFPQFIMPQ QPQLMQYIVL GVTTIVVDII VMIGYATLAQ RIALWIKGPK 
QMKALNKIFG SLFMLVGALL ASARHA