Gene EcHS_A3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3987 
SymbolilvE 
ID5591058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3980897 
End bp3981826 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID640923092 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001460563 
Protein GI157163245 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA AGAAAGCTGA TTACATTTGG TTCAATGGGG AGATGGTTCG CTGGGAAGAC 
GCGAAGGTGC ATGTGATGTC GCACGCGCTG CACTATGGCA CCTCGGTTTT TGAAGGCATC
CGTTGCTACG ACTCGCACAA AGGACCGGTT GTATTCCGCC ATCGTGAGCA TATGCAGCGT
CTGCATGACT CCGCCAAAAT CTATCGCTTT CCGGTTTCGC AGAGCATTGA TGAGCTGATG
GAAGCTTGTC GTGACGTGAT CCGCAAAAAC AATCTCACCA GCGCCTATAT CCGTCCGCTG
ATCTTCGTCG GTGATGTTGG CATGGGCGTT AACCCGCCAG CGGGATACTC AACCGATGTG
ATTATCGCCG CTTTCCCGTG GGGAGCGTAT CTGGGCGCAG AAGCGCTGGA GCAGGGGATC
GATGCGATGG TTTCCTCCTG GAACCGCGCA GCACCAAACA CCATCCCAAC CGCGGCAAAA
GCCGGTGGTA ACTACCTCTC TTCCCTGCTG GTGGGTAGTG AAGCACGCCG CCACGGTTAT
CAGGAAGGTA TCGCGCTGGA TGTGAATGGT TACATCTCTG AAGGTGCAGG CGAAAACCTG
TTTGAAGTGA AAGACGGCGT GCTGTTCACC CCACCGTTCA CCTCCTCCGC GCTGCCGGGT
ATTACCCGTG ATGCCATCAT CAAACTGGCA AAAGAGCTGG GAATTGAAGT CCGTGAGCAG
GTGCTGTCGC GCGAATCCCT GTACCTGGCG GATGAAGTGT TTATGTCCGG TACTGCGGCA
GAAATCACGC CAGTGCGCAG CGTAGATGGT ATTCAGGTTG GTGAAGGCCG TTGCGGCCCG
GTTACCAAAC GCATCCAGCA AGCCTTCTTC GGCCTCTTCA CTGGCGAAAC CGAAGATAAA
TGGGGCTGGT TAGATCAAGT TAATCAATAA
 
Protein sequence
MTTKKADYIW FNGEMVRWED AKVHVMSHAL HYGTSVFEGI RCYDSHKGPV VFRHREHMQR 
LHDSAKIYRF PVSQSIDELM EACRDVIRKN NLTSAYIRPL IFVGDVGMGV NPPAGYSTDV
IIAAFPWGAY LGAEALEQGI DAMVSSWNRA APNTIPTAAK AGGNYLSSLL VGSEARRHGY
QEGIALDVNG YISEGAGENL FEVKDGVLFT PPFTSSALPG ITRDAIIKLA KELGIEVREQ
VLSRESLYLA DEVFMSGTAA EITPVRSVDG IQVGEGRCGP VTKRIQQAFF GLFTGETEDK
WGWLDQVNQ