Gene EcHS_A3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3953 
SymbolatpE 
ID5591141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3948129 
End bp3948368 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content54% 
IMG OID640923060 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_001460537 
Protein GI157163219 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000000343457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACC TGAATATGGA TCTGCTGTAC ATGGCTGCCG CTGTGATGAT GGGTCTGGCG 
GCAATCGGTG CTGCGATCGG TATCGGCATC CTCGGGGGTA AATTCCTGGA AGGCGCAGCG
CGTCAACCTG ATCTGATTCC TCTGCTGCGT ACTCAGTTCT TTATCGTTAT GGGTCTGGTG
GATGCTATCC CGATGATCGC TGTAGGTCTG GGTCTGTACG TGATGTTCGC TGTCGCGTAG
 
Protein sequence
MENLNMDLLY MAAAVMMGLA AIGAAIGIGI LGGKFLEGAA RQPDLIPLLR TQFFIVMGLV 
DAIPMIAVGL GLYVMFAVA