| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3906 |
|---|
| Symbol | dgoK |
|---|
| ID | 5591959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3900767 |
|---|
| End bp | 3901645 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640923014 |
|---|
| Product | 2-dehydro-3-deoxygalactonokinase |
|---|
| Protein accession | YP_001460491 |
|---|
| Protein GI | 157163173 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTC GCTACATCGC AATTGACTGG GGATCGACCA ATCTGCGCGC CTGGCTTTAT
CAGGGCGACC ACTGCCTGGA GAGCAGGCAA TCAGAAGCAG GCGTCACGCG CCTGAACGGA
AAATCTCCGG CTGCGGTGTT AGCAGAAGTC ACGACCGACT GGCGTGAAGA GAAAACGCCA
GTGGTAATGG CAGGAATGGT TGGCAGCAAC GTCGGCTGGA AAGTTGCACC GTATTTATCT
GTTCCTGCCT GTTTTTCGTC TATTGGCGAA CAATTAACGT CAGTTGGCGA CAATATCTGG
ATTATTCCCG GATTATGTGT CTCTCATGAC GATAACCACA ATGTGATGCG CGGCGAAGAA
ACACAATTGA TCGGCGCGCG AGCTCTGGCT CCTTCCTCTC TTTATGTCAT GCCCGGAACT
CATTGCAAAT GGGTGCAGGC CGATAGCCAG CAAATCAACG ATTTTCGCAC CGTGATGACC
GGTGAATTAC ATCATTTACT GTTAAATCAC TCATTGATTG GCGCAGGTTT GCCGCCGCAG
GAAAACTCTG CCGATGCCTT CACAGCTGGC CTTGAGCGTG GTCTTAATAC GCCCGCCATA
TTGCCGCAGC TTTTTGGAGT TCGCGCCTCG CATGTGCTGG GAACACTTCC CCGCGAACAG
GTCAGCGAAT TTCTCTCTGG TTTGTTGATT GGCGCAGAGG TCGCCAGTAT GCGCGACTAT
GTGGCCCATC AACACGCCAT CACCCTTGTC GCCGGAACAT CGCTGACCGC GCGCTACCAG
CAAGCCTTTC AGGCGATGGG TTGCGACGTG ACGGCGGTGG CGGGCGACAC GGCATTTCAG
GCTGGTATAA GGAGCATCGC TCATGCAGTG GCAAACTAA
|
|---|
| Protein sequence | MTARYIAIDW GSTNLRAWLY QGDHCLESRQ SEAGVTRLNG KSPAAVLAEV TTDWREEKTP
VVMAGMVGSN VGWKVAPYLS VPACFSSIGE QLTSVGDNIW IIPGLCVSHD DNHNVMRGEE
TQLIGARALA PSSLYVMPGT HCKWVQADSQ QINDFRTVMT GELHHLLLNH SLIGAGLPPQ
ENSADAFTAG LERGLNTPAI LPQLFGVRAS HVLGTLPREQ VSEFLSGLLI GAEVASMRDY
VAHQHAITLV AGTSLTARYQ QAFQAMGCDV TAVAGDTAFQ AGIRSIAHAV AN
|
|---|
| |