Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3896 |
Symbol | |
ID | 5591342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3891783 |
End bp | 3893444 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923004 |
Product | hypothetical protein |
Protein accession | YP_001460481 |
Protein GI | 157163163 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TAGCATTAAC GGTCAGTATT CTGGCTTTGG TGGCAGTCGT CGGTTTGTTT ATCGGCAACG TCAAATTTCG CGGCATAGGA TTAGGTATTG GCGGCGTGCT GTTTGGTGGG ATCATCGTCG GCCATTTTGT TTCTCAGGCG GGAATGACAT TAAGTAGCGA TATGCTGCAT GTTATTCAGG AATTTGGCCT GATCCTGTTC GTTTATACCA TCGGGATTCA GGTGGGTCCG GGCTTCTTTG CCTCATTGCG CGTCTCCGGA TTACGCCTCA ACCTGTTTGC TGTTCTGATC GTCATCATCG GTGGTCTGGT TACCGCCATC CTGCATAAAC TGTTTGATAT TCCACTGCCG GTAGTGCTGG GGATTTTCTC CGGTGCGGTA ACCAATACGC CAGCGCTGGG GGCAGGGCAG CAGATCTTGC GCGACCTGGG TACACCAATG GAAATGGTCG ATCAGATGGG GATGAGTTAT GCGATGGCGT ATCCATTCGG CATTTGCGGG ATATTGTTCA CCATGTGGAT GTTGCGGGTT ATTTTCCGCG TCAATGTCGA GACAGAAGCC CAGCAGCACG AGTCTTCACG CACCAATGGC GGCGCGCTGA TCAGGACTAT CAATATTCGC GTTGAGAACC CTAACCTGCA TGATTTAGCC ATTAAAGATG TACCTATTCT CAACGGCGAC AAAATTATCT GCTCGCGTCT GAAACGTGAA GAAACCCTAA AAGTTCCTTC GCCAGATACC ATTATCCAAC TGGGCGATTT GCTGCATCTG GTGGGGCAGC CAGCGGATTT ACATAATGCG CAACTGGTGA TTGGTCAGGA GGTCGATACC TCGCTGTCTA CGAAAGGCAC TGATTTGCGC GTCGAGCGTG TGGTGGTCAC CAATGAAAAC GTGCTCGGAA AACGTATTCG CGACCTGCAC TTTAAAGAAC GCTATGACGT TGTTATCTCG CGCCTGAACC GTGCCGGGGT CGAACTGGTC GCCAGTGGCG ATATCAGCCT GCAGTTCGGC GATATTCTCA ACCTGGTGGG GCGTCCGTCC GCAATTGATG CCGTTGCCAA TGTGCTGGGG AATGCGCAGC AAAAACTGCA ACAGGTTCAG ATGTTGCCGG TGTTTATTGG TATCGGGCTT GGCGTATTGT TAGGCTCTAT TCCCGTCTTT GTGCCGGGAT TCCCGGCCGC GTTGAAACTG GGGCTGGCGG GCGGTCCGCT GATTATGGCG TTGATCCTCG GGCGTATCGG CAGTATTGGC AAGCTGTACT GGTTTATGCC GCCAAGTGCC AACCTCGCGC TGCGGGAGCT GGGGATCGTG CTGTTCCTCT CGGTCGTTGG TCTGAAATCT GGTGGGGATT TTGTGAATAC CCTGGTCAAT GGCGAAGGGC TAAGCTGGAT TGGTTATGGT GCCCTGATCA CCGCCGTTCC GCTGATTACT GTTGGTATTC TGGCGCGGAT GTTAGCCAAA ATGAATTACC TGACCATGTG CGGGATGCTG GCTGGCTCCA TGACCGATCC ACCGGCGCTG GCATTTGCTA ATAATCTTCA TCCAACCAGC GGTGCAGCGG CGCTCTCTTA CGCCACTGTC TATCCGTTAG TGATGTTCCT GCGCATTATC ACCCCCCAAT TACTGGCGGT GCTCTTCTGG AGTATCGGTT AA
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Protein sequence | MSDIALTVSI LALVAVVGLF IGNVKFRGIG LGIGGVLFGG IIVGHFVSQA GMTLSSDMLH VIQEFGLILF VYTIGIQVGP GFFASLRVSG LRLNLFAVLI VIIGGLVTAI LHKLFDIPLP VVLGIFSGAV TNTPALGAGQ QILRDLGTPM EMVDQMGMSY AMAYPFGICG ILFTMWMLRV IFRVNVETEA QQHESSRTNG GALIRTINIR VENPNLHDLA IKDVPILNGD KIICSRLKRE ETLKVPSPDT IIQLGDLLHL VGQPADLHNA QLVIGQEVDT SLSTKGTDLR VERVVVTNEN VLGKRIRDLH FKERYDVVIS RLNRAGVELV ASGDISLQFG DILNLVGRPS AIDAVANVLG NAQQKLQQVQ MLPVFIGIGL GVLLGSIPVF VPGFPAALKL GLAGGPLIMA LILGRIGSIG KLYWFMPPSA NLALRELGIV LFLSVVGLKS GGDFVNTLVN GEGLSWIGYG ALITAVPLIT VGILARMLAK MNYLTMCGML AGSMTDPPAL AFANNLHPTS GAAALSYATV YPLVMFLRII TPQLLAVLFW SIG
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