Gene EcHS_A3895 details

Gene Information

• Locus tag: EcHS_A3895
• ID: 5591341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3891070
• End bp: 3891786
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640923003
• Product: GntR family transcriptional regulator
• Protein accession: YP_001460480
• Protein GI: 157163162
• COG category: [K] Transcription
• COG ID: [COG2188] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 79
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTACA AAAGCATTGC GGAGCGGTTA AGAATTCGAC TTAATTCCGC AGATTTCACG 
CTAAACAGCC TTCTTCCCGG TGAAAAAAAG TTGGCGGAAG AATTTGCGGT ATCGCGGATG 
ACCATCCGTA AAGCGATTGA CCTGCTGGTA GCGTGGGGGT TGGTGGTCCG CCGCCACGGC 
AGCGGCACTT ACCTGGTGCG CAAAGATGTA CTGCATCAAA CCGCCAGCCT GACCGGGCTG 
GTGGAGGTGT TAAAACGGCA GGGAAAAACG GTCACCAGCC AGGTGCTGAT TTTTGAAATC 
ATGCCTGCGC CTCCGGCCAT TGCCAGCCAG TTACGGATTC AAATCAACGA GCAGATCTAC 
TTCTCCCGTC GCGTTCGTTT TGTGGAAGGG AAACCGCTGA TGCTGGAAGA CAGCTATATG 
CCGGTAAAAC TGTTCCGTAA TCTTTCGCTG CAACATCTGG AAGGGTCGAA GTTTGAATAT 
ATTGAACAAG AGTGCGGGAT TTTGATTGGC GGTAATTATG AAAGCCTGAT GCCGGTGCTC 
GCCGATAGAC TGCTGGCGCG GCAAATGAAG GTAGCGGAAC ACACGCCACT GCTGCGGATC 
ACCTCGTTGT CATATAGCGA GAGCGGGGAG TTTTTGAATT ATTCAGTAAT GTTCAGAAAT 
GCCAACGAAT ACCAGGTGGA GTACCATTTA CGGCGACTCC ACCCGGAAAA GAGTTAA 

 

Protein sequence

MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV AWGLVVRRHG 
SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI MPAPPAIASQ LRIQINEQIY 
FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL QHLEGSKFEY IEQECGILIG GNYESLMPVL 
ADRLLARQMK VAEHTPLLRI TSLSYSESGE FLNYSVMFRN ANEYQVEYHL RRLHPEKS