Gene EcHS_A3894 details

Gene Information

• Locus tag: EcHS_A3894
• ID: 5595084
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 3889158
• End bp: 3891035
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640923002
• Product: PTS system, alpha-glucoside-specific IIBC component
• Protein accession: YP_001460479
• Protein GI: 157163161
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; [COG1264] Phosphotransferase system IIB components
• TIGRFAM ID: [TIGR00826] PTS system, glucose-like IIB component; [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component; [TIGR02005] PTS system, alpha-glucoside-specific IIBC component

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCCAC AAGTTCTGCT TAATCGATTG AAAAAACATC TTTTTTTTAA AGATGTGTTC 
GATGCTGTGT ACCAGTGCTC ACAGATGTCT ACTTTTTCGC GAAAACGTAG ATCTCTACCG 
CCCAACGAAA AGCATGAAAG CGATCACGAA TCCCATTGGG TCGTCATGTT CTGCCGATCG 
CATCTTCCTA TCCTCGCTCC AGGCCTGCCG CATAACCAAT CAGGCTTCCT ACTTACAGAA 
TTGAGAAAAG AGGATGTGGA AATGCTCAGT CAAATTCAAC GCTTTGGCGG CGCGATGTTC 
ACGCCAGTGC TGCTGTTTCC CTTCGCCGGG ATTGTGGTGG GTCTTGCCAT CTTGCTGCAA 
AACCCGATGT TTGTCGGGGA ATCACTGACC GATCCGAACA GTTTATTCGC GCAAATCGTA 
CACATTATTG AAGAGGGCGG TTGGACGGTA TTCCGTAATA TGCCGCTGAT TTTTGCTGTC 
GGTTTACCCA TTGGCCTTGC TAAGCAAGCG CAGGGGCGTG CTTGTCTGGC GGTGATGGTG 
AGTTTCCTGA CCTGGAACTA TTTCATCAAC GCGATGGGAA TGACCTGGGG AAGCTACTTC 
GGCGTCGATT TCACTCAGGA CGCGGTGGCA GGTAGCGGTC TGACAATGAT GGCCGGGATT 
AAAACCCTCG ATACCAGCAT TATCGGCGCA ATTATCATTT CCGGCATTGT GACGGCGCTG 
CATAACCGTC TGTTCGATAA AAAACTGCCG GTTTTTCTCG GCATTTTCCA GGGGACGTCT 
TATGTGGTGA TTATCGCCTT CCTGGTGATG ATCCCCTGTG CCTGGCTGAC GTTGCTCGGC 
TGGCCAAAAG TACAAATGGG GATTGAATCT CTGCAAGCGT TCCTGCGTTC GGCGGGTGCA 
CTTGGGGTCT GGGTTTACAC CTTCCTCGAA CGTATTCTGA TCCCAACCGG TTTACACCAC 
TTCATCTACG GACAGTTTAT CTTTGGTCCG GCAGCTGTTG AAGGCGGCAT TCAGATGTAC 
TGGGCGCAGC ATCTGCAAGA GTTCAGTTTG AGCGCCGAGC CGCTGAAATC GTTGTTCCCG 
GAAGGCGGTT TTGCCCTGCA CGGTAACTCA AAAATCTTTG GTGCCGTGGG CATTTCTTTA 
GCGATGTACT TCACTGCCGC ACCGGAAAAT CGGGTAAAAG TGGCGGGCTT GCTGATTCCC 
GCAACCTTAA CCGCCATGCT GGTGGGAATT ACCGAACCGC TGGAATTTAC CTTCCTGTTC 
ATTTCACCGT TGCTGTTTGC GGTACACGCC GTGCTGGCGG CCTCAATGTC GACCGTAATG 
TATCTCTTTG GTGTGGTGGG CAACATGGGC GGAGGTCTGA TTGACCAGGT TTTACCGCAA 
AACTGGATCC CGATGTTCAG CAACCACGCG GATATGATGC TGACCCAAAT CGCCATTGGG 
TTGTGCTTTA CCCTGCTGTA CTTCGTGGTT TTCCGCACAC TGATTCTGCA GTTCAACATG 
TGCACGCCGG GACGTGAAGA TGCGGAAGTG AAACTCTACT CAAAAGCCGA ATACAAAGCC 
TCGCGAGGCC AAACCACCGC GGCAGAGCCA AAAAAAGAGC TGGATCAGGC TGCCGGTATC 
CTGCAAGCCC TGGGCGGGGT CGGCAATATC TCCAGCATTA ACAATTGCGC GACGCGTTTA 
CGTATTGCAC TGCATGACAT GTCACAAACG CTGGATGACG AAGTCTTTAA AAAGCTGGGA 
GCGCACGGCG TCTTCCGTAG TGGCGATGCC ATTCAGGTGA TCATTGGTCT GCATGTATCC 
CAGCTGCGTG AACAGCTCGA TAGCTTAATT AATTCTCATC AATCAGCAGA AAATGTTGCC 
ATTACGGAGG CAGTATAA 

 

Protein sequence

MRPQVLLNRL KKHLFFKDVF DAVYQCSQMS TFSRKRRSLP PNEKHESDHE SHWVVMFCRS 
HLPILAPGLP HNQSGFLLTE LRKEDVEMLS QIQRFGGAMF TPVLLFPFAG IVVGLAILLQ 
NPMFVGESLT DPNSLFAQIV HIIEEGGWTV FRNMPLIFAV GLPIGLAKQA QGRACLAVMV 
SFLTWNYFIN AMGMTWGSYF GVDFTQDAVA GSGLTMMAGI KTLDTSIIGA IIISGIVTAL 
HNRLFDKKLP VFLGIFQGTS YVVIIAFLVM IPCAWLTLLG WPKVQMGIES LQAFLRSAGA 
LGVWVYTFLE RILIPTGLHH FIYGQFIFGP AAVEGGIQMY WAQHLQEFSL SAEPLKSLFP 
EGGFALHGNS KIFGAVGISL AMYFTAAPEN RVKVAGLLIP ATLTAMLVGI TEPLEFTFLF 
ISPLLFAVHA VLAASMSTVM YLFGVVGNMG GGLIDQVLPQ NWIPMFSNHA DMMLTQIAIG 
LCFTLLYFVV FRTLILQFNM CTPGREDAEV KLYSKAEYKA SRGQTTAAEP KKELDQAAGI 
LQALGGVGNI SSINNCATRL RIALHDMSQT LDDEVFKKLG AHGVFRSGDA IQVIIGLHVS 
QLREQLDSLI NSHQSAENVA ITEAV