| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3875 |
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| Symbol | nepI |
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| ID | 5592362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3870132 |
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| End bp | 3871487 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640922985 |
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| Product | ribonucleoside transporter |
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| Protein accession | YP_001460462 |
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| Protein GI | 157163144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAAGA CGTTCACGCC GCATCCGGTA ATCTTTGCCC TGTTCCGTTT CGATCTTAAC
TCCAGCTCAA GCAACACCGT AAAAGTTGCA AAAACGTTAA ATGCGTCACA CATTTCAATG
TTAAAGTGGT CGGCTTTTCC CCTGAAACAT GCCACGGGTA ACACCATGAG TGAATTTATT
GCCGAAAACC GCGGCGCGGA TGCCATCACC CGACCGAACT GGTCAGCCGT TTTCTCGGTG
GCGTTTTGTG TCGCCTGTCT GATTATCGTT GAGTTTTTGC CCGTCAGTTT GTTGACGCCA
ATGGCCCAGG ATTTAGGCAT TTCGGAAGGG GTTGCCGGGC AATCGGTGAC CGTGACCGCC
TTTGTGGCAA TGTTTGCCAG TTTGTTTATT ACCCAGACAA TTCAGGCTAC TGACCGCCGC
TACGTTGTTA TTTTGTTTGC CGTTTTGCTG ACGCTCTCCT GCTTGCTGGT TTCCTTTGCT
AACTCATTCA GTTTGCTTTT AATCGGTCGT GCCTGTCTGG GGCTGGCGCT GGGCGGGTTC
TGGGCGATGT CGGCGTCGCT GACCATGCGT CTGGTGCCGC CGCGTACGGT GCCGAAGGCG
CTGTCGGTGA TCTTCGGCGC GGTTTCTATT GCGCTGGTGA TTGCCGCGCC GTTGGGCAGT
TTTTTAGGCG AGCTTATCGG TTGGCGCAAT GTCTTTAATG CGGCGGCGGT GATGGGCGTG
CTGTGTATTT TCTGGATTAT CAAATCATTG CCTTCACTGC CAGGCGAACC CTCGCATCAG
AAACAAAATA CTTTCCGCTT ATTACAACGT CCGGGTGTGA TGGCAGGGAT GATCGCCATC
TTCATGTCTT TCGCCGGGCA GTTTGCTTTC TTCACGTATA TTCGCCCGGT GTATATGAAC
CTGGCGGGAT TCGGCGTGGA TGGCTTAACG CTGGTGCTGT TGAGTTTTGG TATCGCCAGC
TTTATTGGTA CGTCGCTTTC GTCGTTCATT CTTAAACGTT CGGTAAAACT GGCCTTAGCA
GGCGCGCCGT TAATACTGGC TGTGAGTGCG TTGGTACTGA CGTTGTGGGG AAGCGATAAA
ATCGTTGCTA CCGGCGTGGC GATTATCTGG GGGCTAACTT TTGCATTGGT TCCCGTCGGC
TGGTCAACGT GGATCACCCG CTCGCTGGCC GATCAGGCAG AAAAAGCCGG GTCTATTCAG
GTGGCGGTTA TTCAGCTTGC TAATACCTGT GGCGCGGCAA TCGGCGGTTA TGCGCTGGAT
AATATTGGTC TGACTTCGCC GTTGATGTTG TCCGGCACAT TGATGTTGCT GACTGCATTG
TTGGTTACTG CAAAGGTGAA AATGAAGAAA TCCTGA
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| Protein sequence | MDKTFTPHPV IFALFRFDLN SSSSNTVKVA KTLNASHISM LKWSAFPLKH ATGNTMSEFI
AENRGADAIT RPNWSAVFSV AFCVACLIIV EFLPVSLLTP MAQDLGISEG VAGQSVTVTA
FVAMFASLFI TQTIQATDRR YVVILFAVLL TLSCLLVSFA NSFSLLLIGR ACLGLALGGF
WAMSASLTMR LVPPRTVPKA LSVIFGAVSI ALVIAAPLGS FLGELIGWRN VFNAAAVMGV
LCIFWIIKSL PSLPGEPSHQ KQNTFRLLQR PGVMAGMIAI FMSFAGQFAF FTYIRPVYMN
LAGFGVDGLT LVLLSFGIAS FIGTSLSSFI LKRSVKLALA GAPLILAVSA LVLTLWGSDK
IVATGVAIIW GLTFALVPVG WSTWITRSLA DQAEKAGSIQ VAVIQLANTC GAAIGGYALD
NIGLTSPLML SGTLMLLTAL LVTAKVKMKK S
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