Gene EcHS_A3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3835 
SymbolwaaW 
ID5592838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3830942 
End bp3831967 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content37% 
IMG OID640922947 
Productlipopolysaccharide 1,2-galactosyltransferase 
Protein accessionYP_001460425 
Protein GI157163107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0000101924 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAT TAGCTGAGAG TATTACTGAA GTCGCTGTCT CTGGGGAAAT TGCTAACACC 
GATCGTGTGT TAAATATCGC TTACGGTATT GACCGTAACT TTTTATTTGG TGCGGCAGTA
TCTATGCAAT CAGTTGTTAT GCATAACCCG GACCTTGCGG TTAAGTTTCA TCTCTTTACC
GACTACATTG ATGAAGATTA TCTACAACGT GTTAATGCTT TTACCAGCAA AAATGCTAAC
GTTGAAGTAA GAATTTATAA AGTCTCCAAT GCCTTTATTG ATATCTTCCC CAGCCTGAAA
CAGTGGTCTT ATGCAACATT CTTCCGTTTA GTTGCGTTCC AGTATCTGAG TGAAACTATT
GAAAATCTGT TATATATCGA TGCTGATGTC ATCTGTAAAG GCTCATTAGC TGGATTGCTT
GATATTAATT TTGATGGGGA TAAGTTTGCA GCTGTTATTA AAGATGTGCC TTTTATGCAG
GAAAAACCAG CGAAGCGTCT GGCTATAGAG GGACTTCCAG GGAATTATTT CAACGCCGGT
GTAGTATATC TGCAGCTTGA AGCATGGGCG AAAAATGATT TTATGAATAA AGCCATTGCT
ATGCTGGCAA GTGACCCGCA GCACACGAAG TATAAATGCC TTGATCAGGA TATTTTAAAT
ATTCTGTTTT TTGGTCATTG TATTTTTATT AGCGGCGATT ATGATTGCTT TTATGGCATC
GATTATGAGT TAAAAAATAA AAGCGATGAA GATTATAAAA AGACCATTAC CGATGATACT
AAGCTGATTC ATTATGTTGG CGTAACGAAG CCCTGGAACG ACTGGACGAA TTATCCCTGC
CAGAACTATT TTAATGAGGC TTATCAGGCT TCTTGCTGGA ATGATGTGGC GTTTATTCCA
GCCACGAATG AAAAGCAGTA TCAAGTGAAA TATCAACATG CAAAGAAAAA TGGTGATACG
TTTAACGCTT TTATTTACTT CATTAAATTT AAATTAAATA AGTATAAAAG AAAACTATTT
GGGTAA
 
Protein sequence
MDLLAESITE VAVSGEIANT DRVLNIAYGI DRNFLFGAAV SMQSVVMHNP DLAVKFHLFT 
DYIDEDYLQR VNAFTSKNAN VEVRIYKVSN AFIDIFPSLK QWSYATFFRL VAFQYLSETI
ENLLYIDADV ICKGSLAGLL DINFDGDKFA AVIKDVPFMQ EKPAKRLAIE GLPGNYFNAG
VVYLQLEAWA KNDFMNKAIA MLASDPQHTK YKCLDQDILN ILFFGHCIFI SGDYDCFYGI
DYELKNKSDE DYKKTITDDT KLIHYVGVTK PWNDWTNYPC QNYFNEAYQA SCWNDVAFIP
ATNEKQYQVK YQHAKKNGDT FNAFIYFIKF KLNKYKRKLF G