Gene EcHS_A3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3686 
Symbol 
ID5594307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3675804 
End bp3676871 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content59% 
IMG OID640922800 
ProductMFP family transporter 
Protein accessionYP_001460280 
Protein GI157162962 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA GTAAGCGCCA TCTGGCGTGG TGGGTTGTCG GGTTACTGGC GGTGGCGGCT 
ATCGTGGCGT GGTGGCTGTT GCGCCCGGCA GGTGTGCCGG AAGGCTTTGC CGTCAGCAAT
GGGCGCATTG AAGCGACGGA AGTGGATATC GCCAGCAAAA TTGCCGGGCG TATCGACACC
ATTCTGGTGA AAGAAGGCCA GTTTGTTCGC GAAGGCGAAG TGCTGGCGAA GATGGATACT
CGCGTGTTGC AGGAACAGCG ACTGGAAGCC ATCGCGCAAA TCAAAGCAGC ACAAAGTGCC
GTTGCTGCCG CGCAGGCTTT GCTGGAGCAA CGGCAAAGCG AAACTCGTGC CGCGCAGTCG
CTGGTTAATC AACGCCAGGC CGAACTGGAC TCCGTGGCTA AACGTCATAC GCGTTCCCGC
TCGCTCGCCC AACGAGGGGC TATTTCTGCG CAACAGCTGG ATGACGATCG CGCCGCCGCT
GAGAGCGCCC GAGCTGCGCT GGAATCGGCG AAAGCTCAGG TATCGGCTTC TAAAGCGGCT
ATAGAAGCGG CACGCACCAA TATCATTCAG GCGCAAACTC GCGTCGAAGC CGCACAAGCC
ACTGAACGGC GCATTGCCGC AGATATCGAT GACAGCGAAC TGAAAGCCCC GCGTGATGGA
CGCGTACAAT ATCGCGTTGC CGAGCCAGGG GAAGTGCTGG CGGCAGGCGG TCGGGTGCTG
AATATGGTCG ATCTCAGCGA CGTCTATATG ACTTTCTTCC TGCCAACCGA ACAGGCGGGC
ACGCTGAAAC TTGGCGGTGA AGCCCGGCTG ATCCTCGATG CCGCGCCAGA TCTGCGTATT
CCGGCGACCA TCAGTTTTGT CGCCAGTGTC GCCCAGTTCA CGCCAAAAAC CGTCGAAACC
AGCGATGAAC GGCTGAAACT GATGTTCCGC GTCAAAGCGC GTATCCCACC GGAATTACTC
CAGCAGCATC TGGAATATGT CAAAACCGGT TTACCGGGCG TAGCGTGGGT GCGGGTGAAT
GAAGAACTTC CGTGGCCTGA CGACCTCGTG GTGAGGTTGC CGCAATGA
 
Protein sequence
MDKSKRHLAW WVVGLLAVAA IVAWWLLRPA GVPEGFAVSN GRIEATEVDI ASKIAGRIDT 
ILVKEGQFVR EGEVLAKMDT RVLQEQRLEA IAQIKAAQSA VAAAQALLEQ RQSETRAAQS
LVNQRQAELD SVAKRHTRSR SLAQRGAISA QQLDDDRAAA ESARAALESA KAQVSASKAA
IEAARTNIIQ AQTRVEAAQA TERRIAADID DSELKAPRDG RVQYRVAEPG EVLAAGGRVL
NMVDLSDVYM TFFLPTEQAG TLKLGGEARL ILDAAPDLRI PATISFVASV AQFTPKTVET
SDERLKLMFR VKARIPPELL QQHLEYVKTG LPGVAWVRVN EELPWPDDLV VRLPQ