Gene EcHS_A3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3542 
Symbol 
ID5594037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3520061 
End bp3520783 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID640922659 
Producthypothetical protein 
Protein accessionYP_001460140 
Protein GI157162822 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.9543e-18 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGGT CGCTTTTAAC CAACGAAACC AGTGAGTTGG ATTTACTGGA TCAACGTCCT 
TTCGACCAGA CCGATTTTGA TATTCTGAAA TCCTACGAAG CGGTGGTGGA CGGGTTAGCG
ATGCTTATTG GCTCCCACTG TGAAATCGTT TTGCACTCTT TGCAGGATCT AAAATGTTCA
GCCATTCGCA TTGCTAACGG TGAACATACC GGCCGGAAGA TTGGTTCGCC AATTACTGAC
CTGGCGCTAC GTATGCTGCA CGATATGACG GGAGCGGATA GCAGCGTTTC TAAATGCTAC
TTTACTCGCG CCAAAAGCGG CGTATTAATG AAGTCCCTGA CTATCGCGAT TCGTAACCGC
GAACAGCGTG TAATTGGTCT GCTGTGCATC AATATGAATC TTGATGTTCC CTTCTCGCAG
ATTATGAGCA CTTTTGTGCC GCCAGAAACC CCGGATGTCG GTTCAAGCGT CAACTTTGCC
TCTTCTGTTG AAGATCTGGT TACCCAAACG CTGGAGTTCA CCATCGAAGA AGTGAATGCC
GATCGCAATG TTTCTAATAA CGCCAAAAAT CGTCAGATTG TGCTGAATCT CTACGAGAAA
GGGATCTTCG ATATTAAAGA CGCGATCAAC CAGGTTGCTG ACCGCCTGAA CATCTCCAAA
CACACTGTCT ATCTCTACAT CCGCCAGTTC AAAAGCGGTG ATTTCCAGGG GCAAGATAAG
TAA
 
Protein sequence
MSRSLLTNET SELDLLDQRP FDQTDFDILK SYEAVVDGLA MLIGSHCEIV LHSLQDLKCS 
AIRIANGEHT GRKIGSPITD LALRMLHDMT GADSSVSKCY FTRAKSGVLM KSLTIAIRNR
EQRVIGLLCI NMNLDVPFSQ IMSTFVPPET PDVGSSVNFA SSVEDLVTQT LEFTIEEVNA
DRNVSNNAKN RQIVLNLYEK GIFDIKDAIN QVADRLNISK HTVYLYIRQF KSGDFQGQDK