| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3529 |
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| Symbol | gspO |
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| ID | 5593496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3509886 |
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| End bp | 3510563 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640922646 |
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| Product | type 4 prepilin peptidase |
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| Protein accession | YP_001460127 |
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| Protein GI | 157162809 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 0.645409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATGC TACTGCCGCT CTTCATTCTG GTTGGTTTTA TTGCAGGTTA TTTTGTTAAT
GCCATCGCCT ATCACCTCTC GCCGTTGGAG GATAAAACGG CGTTAACGTT TCACCAGGTA
TTGGTTCATT TCAGGCAAAA AAAATATGCC TGGCATGATA CAGTGCCCCT GATACTTTGT
GTTGCTGCTG CTATCGCCTG CGCCCTGGCA CCTTTCACGC CCATCGTGAC TGGCGCACTC
TTTCTCTATT TCTGTTTCGT ACTCACGCTC AGTGTTATTG ATTTTCGCAC TCAGCTCCTG
CCCGACAAAC TCACCTTACC GCTGCTCTGG CTTGGCTTGG TATTTAATGC GCAGTATGGA
TTAATTGATT TACATGATGC GGTTTACGGC GCGGTAGCGG GCTATGGGGT GCTGTGGTGT
GTTTACTGGG GCGTCTGGTT AGTTTGTCAC AAAGAGGGAT TGGGCTACGG TGATTTCAAG
CTACTGGCCG CTGCAGGCGC ATGGTGTGGC TGGCAAACGT TGCCAATGAT ACTGCTGATT
GCCTCGCTGG GTGGCATTGG TTACGCCATC GTTTCACAAC TTCTGCAACG CCGGACTATA
ACCACTATCG CATTCGGCCC GTGGCTTGCG CTCGGCAGCA TGATAAACCT GGGGTATCTG
GCCTGGATCT CTTATTAA
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| Protein sequence | MTMLLPLFIL VGFIAGYFVN AIAYHLSPLE DKTALTFHQV LVHFRQKKYA WHDTVPLILC
VAAAIACALA PFTPIVTGAL FLYFCFVLTL SVIDFRTQLL PDKLTLPLLW LGLVFNAQYG
LIDLHDAVYG AVAGYGVLWC VYWGVWLVCH KEGLGYGDFK LLAAAGAWCG WQTLPMILLI
ASLGGIGYAI VSQLLQRRTI TTIAFGPWLA LGSMINLGYL AWISY
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