Gene EcHS_A3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3515 
SymbolrpsJ 
ID5592741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3497302 
End bp3497613 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content55% 
IMG OID640922632 
Product30S ribosomal protein S10 
Protein accessionYP_001460113 
Protein GI157162795 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000492299 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCCTG AAAGCGTTTG ATCATCGTCT GATCGATCAA 
GCAACCGCGG AAATCGTCGA GACTGCCAAG CGCACTGGTG CGCAGGTCCG TGGTCCGATC
CCGCTGCCGA CACGCAAAGA GCGCTTCACT GTTCTGATCT CCCCGCACGT CAACAAAGAC
GCGCGCGATC AGTACGAAAT CCGTACTCAC TTGCGTCTGG TTGACATCGT TGAGCCAACC
GAGAAAACCG TTGATGCTCT GATGCGTCTG GATCTGGCTG CCGGTGTAGA CGTGCAGATC
AGCCTGGGTT AA
 
Protein sequence
MQNQRIRIRL KAFDHRLIDQ ATAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD 
ARDQYEIRTH LRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG