| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3507 |
|---|
| Symbol | rplP |
|---|
| ID | 5593059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3493102 |
|---|
| End bp | 3493512 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640922624 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_001460105 |
|---|
| Protein GI | 157162787 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000000143497 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAAC CAAAGCGTAC AAAATTCCGT AAAATGCACA AAGGCCGTAA CCGCGGTCTG
GCGCAGGGTA CGGATGTTAG CTTCGGCAGC TTCGGTCTGA AAGCTGTTGG CCGTGGTCGT
CTGACTGCCC GTCAGATCGA AGCAGCACGT CGTGCTATGA CCCGTGCAGT TAAGCGTCAA
GGTAAGATCT GGATCCGTGT GTTCCCGGAC AAACCGATCA CTGAAAAGCC GCTGGCAGTG
CGTATGGGTA AAGGTAAAGG TAACGTGGAG TATTGGGTTG CCTTGATTCA GCCGGGTAAA
GTCCTGTATG AAATGGACGG TGTTCCGGAA GAGCTGGCCC GTGAAGCATT CAAGCTGGCA
GCAGCGAAAC TGCCGATTAA AACCACCTTT GTAACTAAGA CGGTGATGTA A
|
|---|
| Protein sequence | MLQPKRTKFR KMHKGRNRGL AQGTDVSFGS FGLKAVGRGR LTARQIEAAR RAMTRAVKRQ
GKIWIRVFPD KPITEKPLAV RMGKGKGNVE YWVALIQPGK VLYEMDGVPE ELAREAFKLA
AAKLPIKTTF VTKTVM
|
|---|
| |