| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3459 |
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| Symbol | acrF |
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| ID | 5594803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3459376 |
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| End bp | 3462480 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640922577 |
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| Product | acriflavine resistance protein F |
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| Protein accession | YP_001460065 |
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| Protein GI | 157162747 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0766453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACT TTTTTATTCG ACGACCGATA TTTGCATGGG TGCTGGCCAT TATTCTGATG
ATGGCGGGCG CACTGGCGAT CCTACAATTG CCCGTCGCTC AGTATCCAAC CATTGCACCG
CCTGCGGTTT CTGTTTCGGC AAACTATCCA GGTGCTGATG CGCAGACCGT GCAGGATACG
GTGACGCAGG TTATCGAACA GAATATGAAT GGTATCGATA ACCTGATGTA TATGTCCTCC
ACCAGCGATT CCGCCGGTAG CGTGACAATT ACCCTTACCT TCCAGTCCGG GACCGATCCT
GATATCGCGC AAGTGCAGGT GCAGAACAAA CTCCAGCTCG CCACGCCGTT GCTGCCGCAG
GAAGTTCAGC AGCAGGGGAT CAGTGTTGAA AAGTCCAGTA GCAGCTATTT GATGGTGGCG
GGCTTTGTCT CTGATAACCC AGACACCACA CAGGACGATA TCTCGGACTA TGTGGCTTCT
AACGTTAAAG ATACGCTTAG CCGTCTGAAT GGCGTCGGTG ACGTACAGCT TTTCGGCGCA
CAGTATGCGA TGCGTATCTG GCTGGACGCC GATCTGCTAA ACAAATATAA ACTGACACCG
GTTGATGTGA TTAACCAGTT GAAGGTACAG AACGATCAGA TCGCTGCCGG ACAGTTGGGC
GGAACGCCAG CGTTACCAGG GCAACAGTTG AATGCCTCGA TTATTGCTCA GACGCGGTTA
AAAAATCCGG AAGAATTCGG CAAAGTGACC CTGCGCGTAA ACAGTGACGG CTCGGTGGTG
CGTCTGAAAG ATGTCGCACG GGTTGAACTT GGCGGTGAAA ACTATAACGT TATCGCTCGC
ATCAACGGAA AACCGGCGGC GGGCCTGGGG ATTAAGCTGG CAACCGGCGC GAATGCTCTC
GATACCGCGA AAGCCATTAA GGCAAAACTG GCGGAATTAC AGCCATTCTT CCCGCAGGGA
ATGAAGGTTC TCTACCCTTA TGACACCACG CCATTCGTCC AGCTTTCTAT TCACGAAGTG
GTAAAAACGC TGTTCGAAGC CATTATGCTG GTGTTCCTGG TGATGTATCT GTTCTTGCAG
AATATGCGAG CAACGCTGAT CCCCACCATT GCGGTACCCG TGGTGTTGTT AGGGACGTTT
GCCATCCTCG CCGCTTTTGG TTACTCCATC AACACACTAA CGATGTTCGG GATGGTGCTT
GCCATCGGGC TGCTCGTCGA TGATGCGATA GTGGTGGTGG AGAACGTCGA GCGCGTGATG
ATGGAGGATA AGCTCCCGCC AAAAGAAGCG ACGGAAAAAT CAATGTCGCA AATTCAGGGC
GCACTGGTGG GTATCGCGAT GGTGCTGTCA GCGGTATTTA TTCCGATGGC ATTCTTCGGC
GGTTCTACTG GGGCAATTTA TCGCCAGTTC TCTATCACCA TCGTTTCGGC AATGGCGCTT
TCTGTTCTGG TGGCATTGAT TCTTACCCCT GCGTTATGTG CAACGCTGCT TAAACCCGTC
TCTGCTGAGC ATCACGAAAA TAAGGGCGGT TTCTTCGGCT GGTTTAATAC CACCTTCGAT
CATAGCGTTA ACCACTACAC CAACAGCGTC GGCAAAATCC TCGGTTCCAC AGGACGATAT
TTACTGATCT ATGCGCTGAT TGTTGCAGGA ATGGTGGTGT TGTTTTTACG TCTTCCGTCT
TCCTTCTTAC CTGAAGAGGA TCAGGGTGTC TTTCTGACCA TGATTCAGTT ACCCGCTGGC
GCGACGCAAG AGCGGACGCA AAAAGTGTTG GATCAAGTGA CGGATTACTA TCTGAAAAAC
GAGAAAGCGA ACGTTGAAAG TGTCTTTACG GTTAACGGCT TTAGCTTCAG CGGCCAGGCA
CAAAACGCCG GTATGGCCTT CGTCAGTCTG AAACCGTGGG AAGAGCGTAA TGGTGATGAA
AACAGTGCGG AAGCGGTAAT CCATCGTGCC AAAATGGAAT TGGGCAAGAT CCGCGACGGT
TTTGTCATTC CATTCAATAT GCCAGCCATT GTTGAACTGG GCACGGCAAC GGGTTTCGAC
TTTGAGTTAA TTGATCAGGC TGGGCTGGGT CACGATGCCC TAACCCAGGC CCGTAACCAG
TTGCTTGGTA TGGCTGCGCA ACATCCTGCC AGCTTAGTCA GCGTGCGTCC TAATGGCCTG
GAAGACACCG CGCAGTTTAA ACTGGAAGTT GACCAGGAAA AGGCGCAGGC ATTAGGTGTT
TCACTTTCTG ACATCAATCA GACCATTTCA ACGGCGCTGG GTGGGACTTA CGTTAACGAC
TTCATCGACC GTGGTCGTGT GAAAAAGGTG TATGTTCAGG CGGATGCCAA ATTCCGTATG
CTGCCAGAAG ATGTCGATAA ACTTTATGTC CGCAGCGCCA ACGGCGAAAT GGTGCCATTC
TCTGCCTTTA CCACTTCACA TTGGGTGTAT GGCTCTCCGC GACTGGAACG CTACAACGGT
CTGCCGTCAA TGGAGATTCA GGGGGAAGCC GCGCCAGGAA CCAGTTCCGG CGATGCCATG
GCGTTGATGG AAAACCTTGC GTCAAAATTA CCTGCGGGCA TTGGTTATGA CTGGACGGGT
ATGTCGTATC AGGAACGCTT ATCGGGAAAC CAGGCTCCCG CTCTGGTAGC AATTTCCTTT
GTGGTTGTTT TCCTGTGCCT TGCTGCACTC TATGAAAGCT GGTCAATTCC TGTCTCGGTT
ATGTTGGTCG TGCCGTTAGG GATTGTCGGC GTGCTGCTGG CGGCGACACT CTTTAATCAA
AAAAATGACG TCTACTTTAT GGTGGGCTTG CTAACGACAA TTGGCTTGTC GGCCAAAAAC
GCTATTTTGA TTGTTGAGTT CGCTAAAGAT CTCATGGAGA AAGAGGGTAA AGGTGTTGTT
GAAGCGACAC TGATGGCAGT ACGTATGCGT CTGCGTCCTA TCCTGATGAC CTCTCTCGCC
TTTATTCTCG GCGTATTACC GCTAGCTATC AGTAACGGTG CCGGCAGTGG CGCGCAGAAC
GCAGTGGGTA TCGGGGTAAT GGGAGGAATG GTCTCTGCAA CGTTGCTGGC AATCTTCTTC
GTACCGGTGT TCTTTGTGGT GATCCGCCGT TGCTTTAAAG GATAA
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| Protein sequence | MANFFIRRPI FAWVLAIILM MAGALAILQL PVAQYPTIAP PAVSVSANYP GADAQTVQDT
VTQVIEQNMN GIDNLMYMSS TSDSAGSVTI TLTFQSGTDP DIAQVQVQNK LQLATPLLPQ
EVQQQGISVE KSSSSYLMVA GFVSDNPDTT QDDISDYVAS NVKDTLSRLN GVGDVQLFGA
QYAMRIWLDA DLLNKYKLTP VDVINQLKVQ NDQIAAGQLG GTPALPGQQL NASIIAQTRL
KNPEEFGKVT LRVNSDGSVV RLKDVARVEL GGENYNVIAR INGKPAAGLG IKLATGANAL
DTAKAIKAKL AELQPFFPQG MKVLYPYDTT PFVQLSIHEV VKTLFEAIML VFLVMYLFLQ
NMRATLIPTI AVPVVLLGTF AILAAFGYSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
MEDKLPPKEA TEKSMSQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SITIVSAMAL
SVLVALILTP ALCATLLKPV SAEHHENKGG FFGWFNTTFD HSVNHYTNSV GKILGSTGRY
LLIYALIVAG MVVLFLRLPS SFLPEEDQGV FLTMIQLPAG ATQERTQKVL DQVTDYYLKN
EKANVESVFT VNGFSFSGQA QNAGMAFVSL KPWEERNGDE NSAEAVIHRA KMELGKIRDG
FVIPFNMPAI VELGTATGFD FELIDQAGLG HDALTQARNQ LLGMAAQHPA SLVSVRPNGL
EDTAQFKLEV DQEKAQALGV SLSDINQTIS TALGGTYVND FIDRGRVKKV YVQADAKFRM
LPEDVDKLYV RSANGEMVPF SAFTTSHWVY GSPRLERYNG LPSMEIQGEA APGTSSGDAM
ALMENLASKL PAGIGYDWTG MSYQERLSGN QAPALVAISF VVVFLCLAAL YESWSIPVSV
MLVVPLGIVG VLLAATLFNQ KNDVYFMVGL LTTIGLSAKN AILIVEFAKD LMEKEGKGVV
EATLMAVRMR LRPILMTSLA FILGVLPLAI SNGAGSGAQN AVGIGVMGGM VSATLLAIFF
VPVFFVVIRR CFKG
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