Gene EcHS_A3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3438 
SymbollytS 
ID5593849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp3441975 
End bp3442463 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID640922556 
Productrod shape-determining protein MreD 
Protein accessionYP_001460044 
Protein GI157162726 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.00180798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGCT ATCGTAGCCA GGGACGCTGG GTAATCTGGC TCTCTTTCCT CATTGCGCTG 
TTGCTGCAAA TCATGCCCTG GCCGGATAAC CTGATTTTTT TCCGGCCAAA CTGGGTGTTA 
CTCATCTTGT TGTATTGGAT CCTGGCCTTG CCTCATCGCG TAAATGTGGG CACAGGTTTT 
GTGATGGGTG CCATACTGGA TCTGATCAGC GGCTCGACGC TTGGCGTACG CGTATTGGCG 
ATGAGCATCA TTGCTTACCT GGTGGCGCTG AAATACCAGC TTTTCCGCAA CCTCGCATTA 
TGGCAGCAGG CGCTGGTCGT CATGTTGCTT TCGCTGGTGG TGGATATTAT TGTTTTCTGG 
GCAGAGTTTT TAGTGATTAA CGTCTCTTTC AGACCGGAAG TGTTCTGGAG TAGTGTAGTC 
AATGGGGTGC TCTGGCCGTG GATTTTCTTG CTGATGCGCA AAGTCCGTCA GCAGTTTGCA 
GTGCAATAA
 
Protein sequence
MASYRSQGRW VIWLSFLIAL LLQIMPWPDN LIFFRPNWVL LILLYWILAL PHRVNVGTGF 
VMGAILDLIS GSTLGVRVLA MSIIAYLVAL KYQLFRNLAL WQQALVVMLL SLVVDIIVFW 
AEFLVINVSF RPEVFWSSVV NGVLWPWIFL LMRKVRQQFA VQ