Gene EcHS_A3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3402 
SymbolelbB 
ID5595429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3400733 
End bp3401386 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content53% 
IMG OID640922522 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001460011 
Protein GI157162693 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TTGGCGTAAT TCTGAGCGGA TGCGGCGTCT ATGACGGTTC TGAAATTCAT 
GAAGCGGTGT TGACGTTGTT AGCTATTTCA CGCAGCGGTG CGCAGGCGGT CTGCTTTGCA
CCGGATAAGC AGCAGGTTGA TGTTATCAAC CATTTAACTG GCGAAGCGAT GACGGAAACG
CGCAATGTGC TGATTGAAGC GGCACGAATA ACGCGCGGTG AAATCCGTCC TCTGGCCCAG
GCCGATGCCG CTGAACTGGA TGCGTTGATT GTGCCGGGGG GGTTTGGCGC GGCGAAGAAT
TTAAGCAATT TTGCCAGTCT TGGTAGCGAA TGCACCGTTG ACCGTGAATT AAAGGCGCTG
GCACAAGCGA TGCATCAGGC CGGAAAACCG CTTGGTTTTA TGTGTATTGC CCCGGCGATG
CTGCCGAAAA TTTTCGATTT CCCGCTGCGT TTGACCATCG GTACTGATAT CGATACCGCA
GAAGTGCTGG AAGAGATGGG CGCGGAGCAT GTGCCGTGTC CTGTCGATGA TATCGTGGTT
GATGAAGACA ATAAGATTGT CACCACCCCA GCATATATGC TGGCGCAGAA CATTGCAGAA
GCGGCGAGCG GCATTGATAA GCTGGTTTCC CGCGTGCTGG TTCTGGCTGA ATGA
 
Protein sequence
MKKIGVILSG CGVYDGSEIH EAVLTLLAIS RSGAQAVCFA PDKQQVDVIN HLTGEAMTET 
RNVLIEAARI TRGEIRPLAQ ADAAELDALI VPGGFGAAKN LSNFASLGSE CTVDRELKAL
AQAMHQAGKP LGFMCIAPAM LPKIFDFPLR LTIGTDIDTA EVLEEMGAEH VPCPVDDIVV
DEDNKIVTTP AYMLAQNIAE AASGIDKLVS RVLVLAE