Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3390 |
Symbol | kdsD |
ID | 5593418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3392193 |
End bp | 3393179 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640922510 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_001459999 |
Protein GI | 157162681 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.997652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACG TAGAGTTACA ACCGGGTTTT GACTTTCAGC AAGCAGGTAA AGAAGTCCTG GCGATTGAAC GTGAATGCCT GGCGGAGCTT GATCAATACA TCAATCAGAA TTTCACGCTT GCCTGTGAAA AGATGTTCTG GTGTAAAGGG AAAGTTGTCG TCATGGGGAT GGGAAAATCG GGGCATATTG GGCGAAAAAT GGCGGCAACG TTTGCCAGCA CCGGTACACC TTCATTTTTC GTCCATCCTG GTGAAGCCGC GCATGGTGAT TTAGGCATGG TTACCCCACA GGATGTGGTG ATTGCTATCT CTAACTCTGG TGAATCCAGC GAAATCACGG CCTTAATTCC AGTGCTTAAG CGTCTTCACG TACCGTTAAT CTGCATCACC GGTCGCCCGG AGAGCAGCAT GGCGCGCGCC GCAGATGTGC ATCTGTGTGT TAAAGTAGCG AAAGAAGCCT GTCCGTTAGG GCTGGCACCG ACCAGCAGCA CCACCGCCAC GCTGGTTATG GGCGATGCCC TCGCTGTCGC GCTGTTAAAA GCACGCGGCT TTACTGCTGA AGATTTTGCG CTCTCACACC CAGGCGGCGC ACTGGGTCGT AAACTTCTGC TGCGCGTAAA CGATATTATG CATACGGGCG ATGAGATCCC GCATGTTAAG AAAACGGCCA GTCTGCGTGA CGCATTGCTG GAAGTTACCC GCAAAAATCT TGGTATGACT GTCATTTGCG ATGACAATAT GATGATTGAA GGCATCTTTA CCGACGGTGA TTTACGCCGT GTCTTCGATA TGGGCGTGGA TGTTCGTCAG TTAAGTATTG CCGATGTGAT GACGCCGGGG GGAATACGTG TGCGCCCTGG CATTCTGGCC GTTGAGGCAC TGAACTTAAT GCAGTCCCGC CATATCACCT CCGTGATGGT TGCCGATGGC GACCATTTAC TCGGTGTGTT ACATATGCAT GATTTACTGC GTGCAGGCGT AGTGTAA
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Protein sequence | MSHVELQPGF DFQQAGKEVL AIERECLAEL DQYINQNFTL ACEKMFWCKG KVVVMGMGKS GHIGRKMAAT FASTGTPSFF VHPGEAAHGD LGMVTPQDVV IAISNSGESS EITALIPVLK RLHVPLICIT GRPESSMARA ADVHLCVKVA KEACPLGLAP TSSTTATLVM GDALAVALLK ARGFTAEDFA LSHPGGALGR KLLLRVNDIM HTGDEIPHVK KTASLRDALL EVTRKNLGMT VICDDNMMIE GIFTDGDLRR VFDMGVDVRQ LSIADVMTPG GIRVRPGILA VEALNLMQSR HITSVMVADG DHLLGVLHMH DLLRAGVV
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