Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3365 |
Symbol | yhbX |
ID | 5593356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3370914 |
End bp | 3372539 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640922485 |
Product | inner membrane protein yhbX |
Protein accession | YP_001459975 |
Protein GI | 157162657 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.00782202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAT TCAACAAATT TGCTAGAAGT TTTAAATCTC ATTGGTTGTT GTATCTTTGT GTTATTGTTT TTGGTATTAC GAACTTAGTC GCCTCTTCCG GCGCGCATAT GGTTCAGCGC TTGCTGTTCT TCGTTCTGAC CATCCTGGTT GTAAAACGTA TATCATCCCT TCCGCTTCGC CTGCTTGTTG CCGCACCATT TGTGTTACTG ACTGCGGCAG ACATGAGTAT TAGCCTCTAT TCATGGTGTA CCTTTGGTAC AACTTTCAAT GATGGATTTG CGATTAGTGT GCTCCAGAGT GATCCGGATG AAGTTGTCAA AATGCTGGGG ATGTATATCC CTTATCTATG TGCCTTTGCT TTTTTATCCC TTCTTTTTTT GGCAGTAATA ATAAAATATG ATGTTTCCTT GCCGACAAAA AAAGTGACAG GAATATTATT GCTGATTGTC ATTTCGGGCA GTTTATTTTC CGCTTGTCAA TTTGCTTATA AAGATGCAAA AAATAAAAAA GCGTTCAGTC CATATATACT AGCGTCGCGA TTTGCTACCT ATACGCCGTT TTTCAATCTC AACTATTTTG CTTTAGCAGC GAAAGAGCAT CAAAGATTAC TCTCAATTGC AAACACGGTG CCGTATTTTC AATTATCAGT CAGGGATACA GGTATTGATA CCTACGTGTT GATTGTGGGG GAGTCTGTAC GTGTCGACAA TATGTCTTTG TATGGATATA CACGCTCTAC GACACCGCAA GTTGAAGCAC AAAGAAAACA GATCAAACTG TTTAATCAAG CAATAAGCGG CGCACCTTAC ACTGCGCTGT CGGTTCCCCT TTCTTTAACT GCTGATTCTG TTTTGAGTCA TGACATTCAT AATTACCCCG ACAACATTAT TAATATGGCT AATCAAGCAG GATTTCAGAC TTTCTGGCTA AGCTCGCAAT CCGCTTTTCG GCAGAATGGT ACAGCAGTTA CCAGTATCGC CATGCGCGCC ATGGAAACAG TTTATGTCAG AGGATTTGAT GAATTGTTGT TGCCGCATTT ATCGCAAGCA TTACAGCAAA ATACGCAGCA AAAGAAACTG ATTGTTCTTC ATTTAAATGG AAGCCATGAA CCGGCTTGTA GCGCCTATCC GCAATCCAGC GCCGTGTTTC AACCGCAGGA CGATCAGGAT GCCTGCTATG ACAACTCCAT TCATTACACA GATAGTTTGC TAGGTCAGGT TTTTGAATTA TTAAAAGATC GCCGCGCCTC GGTCATGTAT TTTGCCGACC ACGGCCTGGA ACGTGACCCT ACGAAGAAGA ACGTCTATTT TCATGGAGGC AGGGAGGCTA GCCAGCAGGC ATATCATGTC CCGATGTTTA TCTGGTATAG CCCCGTTCTT GGGGATGGCG TGGATCGCAC AACGGAAAAC AACATCTTTT CGACAGCTTA CAATAATTAC CTTATTAATG CGTGGATGGG GGTAACAAAG CCGGAACAGC CGCAAACGCT TGAGGAAGTG ATTGCACACT ATAAAGGAGA CTCACGGGTT GTGGATGCAA ACCATGATGT TTTCGATTAT GTGATGCTCA GAAAGGAGTT TACAGAGGAT AAGCAAGGTA ACCCCACCCC TGAAGGGCAG GGTTGA
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Protein sequence | MTVFNKFARS FKSHWLLYLC VIVFGITNLV ASSGAHMVQR LLFFVLTILV VKRISSLPLR LLVAAPFVLL TAADMSISLY SWCTFGTTFN DGFAISVLQS DPDEVVKMLG MYIPYLCAFA FLSLLFLAVI IKYDVSLPTK KVTGILLLIV ISGSLFSACQ FAYKDAKNKK AFSPYILASR FATYTPFFNL NYFALAAKEH QRLLSIANTV PYFQLSVRDT GIDTYVLIVG ESVRVDNMSL YGYTRSTTPQ VEAQRKQIKL FNQAISGAPY TALSVPLSLT ADSVLSHDIH NYPDNIINMA NQAGFQTFWL SSQSAFRQNG TAVTSIAMRA METVYVRGFD ELLLPHLSQA LQQNTQQKKL IVLHLNGSHE PACSAYPQSS AVFQPQDDQD ACYDNSIHYT DSLLGQVFEL LKDRRASVMY FADHGLERDP TKKNVYFHGG REASQQAYHV PMFIWYSPVL GDGVDRTTEN NIFSTAYNNY LINAWMGVTK PEQPQTLEEV IAHYKGDSRV VDANHDVFDY VMLRKEFTED KQGNPTPEGQ G
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