Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3328 |
Symbol | |
ID | 5592783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3332901 |
End bp | 3334055 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640922446 |
Product | AgaS family sugar isomerase |
Protein accession | YP_001459939 |
Protein GI | 157162621 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA ATTACACCCC TGCTGCCGCC GCAACCGGTA CATGGACTGA AGAAGAGATC CGCCATCAGC CTCGCGCATG GATCCGTTCA CTCACCAACA TCGACGCGCT ACGTTCCGCG CTCAATAACT TCCTTGAACC GTTACTGCGC AAAGAGAATC TGCGGATCAT CCTGACCGGA GCCGGAACCT CGGCATTTAT CGGTGACATC ATCGCGCCGT GGCTCGCCAG CCATACCGGT AAAAACTTCA GCGCCGTACC GACCACCGAT CTGGTCACTA ATCCGATGGA CTACCTGAAC CCAGCCCATC CGCTGCTGTT GATCTCCTTC GGTCGATCCG GCAACAGCCC GGAAAGCGTC GCAGCCGTGG AACTGGCAAA TCAATTTGTA CCGGAATGCT ATCACCTGCC GATCACCTGC AACGAAGCGG GCGCTCTTTA CCAAAACGCG ATCAACAGCG ATAACGCGTT TGCCCTGCTG ATGCCCGCAG AAACGCACGA TCGCGGCTTT GCGATGACCA GCAGCATTAC CACCATGATG GCCAGCTGCC TCGCGGTTTT CGCACCTGAG ACGATCAACA GCCAAACCTT CCGCGACGTG GCGGATCGTT GCCAGGCGAT CCTGACCTCA CTGGGCGATT TCAGCGAAGG TGTGTTTGGT TACGCACCGT GGAAACGGAT CGTTTATCTC GGTAGCGGTG GCTTACAGGG CGCAGCACGC GAGTCGGCGC TGAAAGTGCT GGAACTGACG GCGGGTAAAC TGGCGGCCTT TTATGATTCT CCAACCGGAT TCCGTCATGG ACCAAAATCG CTGGTCGATG ACGAAACGCT GGTGGTGGTA TTTGTCTCCA GCCACCCTTA CACCCGTCAG TATGATCTTG ATCTGCTGGC TGAACTTCGC CGTGACAACC AGGCAATGCG TGTAATCGCC ATCGCCGCGG AAAGCAGCGA CATCGTCGCT GCCGGTCCAC ATATCATCCT GCCACCGTCA CGTCACTTTA TCGACGTTGA GCAGGCATTT TGCTTCCTGA TGTACGCCCA GACGTTTGCA CTGATGCAGT CGCTGCACAT GGGCAATACG CCGGATACCC CATCAGCCAG TGGCACCGTT AACCGCGTGG TGCAAGGCGT AATCATTCAT CCGTGGCAGG CATAA
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Protein sequence | MPKNYTPAAA ATGTWTEEEI RHQPRAWIRS LTNIDALRSA LNNFLEPLLR KENLRIILTG AGTSAFIGDI IAPWLASHTG KNFSAVPTTD LVTNPMDYLN PAHPLLLISF GRSGNSPESV AAVELANQFV PECYHLPITC NEAGALYQNA INSDNAFALL MPAETHDRGF AMTSSITTMM ASCLAVFAPE TINSQTFRDV ADRCQAILTS LGDFSEGVFG YAPWKRIVYL GSGGLQGAAR ESALKVLELT AGKLAAFYDS PTGFRHGPKS LVDDETLVVV FVSSHPYTRQ YDLDLLAELR RDNQAMRVIA IAAESSDIVA AGPHIILPPS RHFIDVEQAF CFLMYAQTFA LMQSLHMGNT PDTPSASGTV NRVVQGVIIH PWQA
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