Gene EcHS_A3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3276 
Symbol 
ID5592294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3288777 
End bp3290075 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content54% 
IMG OID640922394 
Productputative hexuronate transporter 
Protein accessionYP_001459888 
Protein GI157162570 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA TTAAAGGGTT ACGTTGGTAT ATGATCGCAC TGGTGACGCT CGGCACCGTG 
CTTGGTTACC TGACGCGTAA CACTGTGGCG GCAGCTGCGC CAACTCTGAT GGAAGAGTTA
AACATCTCCA CCCAACAGTA TTCCTATATC ATCGCAGCCT ATTCTGCTGC TTATACGGTC
ATGCAACCGG TAGCAGGTTA TGTACTGGAT GTGCTGGGTA CGAAAATCGG TTATGCAATG
TTTGCTGTGC TGTGGGCCGT GTTCTGTGGT GCAACCGCGC TGGCAGGTAG CTGGGGTGGC
TTGGCTGTTG CTCGTGGTGC GGTCGGTGCC GCGGAAGCAG CGATGATCCC GGCGGGTCTG
AAAGCCAGCT CCGAATGGTT CCCGGCGAAA GAGCGTTCCA TCGCAGTAGG CTACTTTAAC
GTAGGTTCTT CGATTGGTGC GATGATTGCG CCGCCGCTGG TGGTATGGGC AATCGTAATG
CACAGCTGGC AGATGGCATT TATCATCTCC GGTGCATTGA GCTTTATCTG GGCGATGGCA
TGGCTGATTT TCTATAAACA TCCGCGCGAC CAGAAGCATC TGACCGATGA AGAACGCGAC
TATATTATTA ATGGTCAGGA AGCCCAGCAC CAGGTGAGCA CGGCGAAGAA AATGTCCGTT
GGTCAGATCC TGCGTAACCG TCAGTTCTGG GGTATCGCGC TGCCGCGTTT CCTGGCAGAA
CCGGCCTGGG GTACTTTTAA CGCGTGGATC CCGCTGTTCA TGTTTAAAGT TTACGGCTTT
AACCTGAAAG AGATCGCGAT GTTCGCCTGG ATGCCGATGC TGTTTGCTGA CCTCGGTTGT
ATCCTCGGTG GTTACCTGCC GCCGCTGTTC CAGCGTTGGT TTGGTGTGAA CCTGATCGTT
TCCCGTAAGA TGGTCGTAAC GCTGGGTGCA GTGCTGATGA TTGGCCCGGG TATGATCGGC
CTGTTCACCA ACCCGTATGT CGCAATTATG CTGCTGTGTA TCGGTGGTTT TGCCCACCAG
GCACTGTCTG GCGCGCTGAT TACGCTCTCT TCCGATGTGT TTGGTCGTAA CGAAGTGGCA
ACGGCGAACG GTTTAACCGG GATGTCCGCA TGGCTGGCAA GTACGCTATT TGCGCTGGTT
GTCGGTGCAC TGGCTGACAC CATCGGCTTC AGCCCGCTGT TCGCAGTACT GGCAGTGTTC
GACCTGTTAG GTGCGCTGGT TATCTGGACC GTGTTGCAGA ACAAACCGGC GATTGAGGTG
GCGCAGGAAA CACATAACGA TCCCGCACCG CAACATTAA
 
Protein sequence
MRKIKGLRWY MIALVTLGTV LGYLTRNTVA AAAPTLMEEL NISTQQYSYI IAAYSAAYTV 
MQPVAGYVLD VLGTKIGYAM FAVLWAVFCG ATALAGSWGG LAVARGAVGA AEAAMIPAGL
KASSEWFPAK ERSIAVGYFN VGSSIGAMIA PPLVVWAIVM HSWQMAFIIS GALSFIWAMA
WLIFYKHPRD QKHLTDEERD YIINGQEAQH QVSTAKKMSV GQILRNRQFW GIALPRFLAE
PAWGTFNAWI PLFMFKVYGF NLKEIAMFAW MPMLFADLGC ILGGYLPPLF QRWFGVNLIV
SRKMVVTLGA VLMIGPGMIG LFTNPYVAIM LLCIGGFAHQ ALSGALITLS SDVFGRNEVA
TANGLTGMSA WLASTLFALV VGALADTIGF SPLFAVLAVF DLLGALVIWT VLQNKPAIEV
AQETHNDPAP QH