Gene EcHS_A3242 details

Gene Information

• Locus tag: EcHS_A3242
• Symbol: ttdB
• ID: 5592336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3250816
• End bp: 3251421
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640922360
• Product: L(+)-tartrate dehydratase subunit beta
• Protein accession: YP_001459856
• Protein GI: 157162538
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
• TIGRFAM ID: [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.00139221
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TCCTGACAAC CCCGATCAAA GCTGAAGATC TGCAAGATAT TCGCGTCGGC 
GATGTGATCT ACCTGACCGG TACGCTGGTG ACCTGCCGCG ACGTTTGTCA CCGCCGCTTG 
ATCGAACTCA AACGTCCGAT CCCTTACGAT CTCAACGGCA AAGCGATTTT CCACGCTGGC 
CCCATCGTGC GTAAAAACGG CGATAAATGG GAGATGGTTT CCGTTGGCCC GACAACCAGT 
ATGCGTATGG AAAGTTTTGA ACGTGAATTT ATCGAGCAGA CCGGCGTGAA ACTGGTGGTT 
GGCAAAGGTG GTATGGGGCC GCTGACCGAA GAAGGCTGCC AGAAATTCAA GGCGCTACAT 
GTGATTTTCC CGGCAGGCTG CGCGGTGCTG GCAGCAACCC AGGTAGAAGA GATTGAAGAA 
GTGCACTGGA CAGAACTCGG GATGCCGGAG TCACTGTGGG TCTGCCGGGT CAAAGAGTTC 
GGCCCGCTGA TTGTCTCTAT TGATACCCAC GGCAACAACC TGATAGCCGA AAACAAAAAG 
CTATTCGCCG AACGCCGCGA TCCCATCGTG GAAGAGATCT GCGAGCACGT CCATTACATC 
AAATAA 

 

Protein sequence

MKKILTTPIK AEDLQDIRVG DVIYLTGTLV TCRDVCHRRL IELKRPIPYD LNGKAIFHAG 
PIVRKNGDKW EMVSVGPTTS MRMESFEREF IEQTGVKLVV GKGGMGPLTE EGCQKFKALH 
VIFPAGCAVL AATQVEEIEE VHWTELGMPE SLWVCRVKEF GPLIVSIDTH GNNLIAENKK 
LFAERRDPIV EEICEHVHYI K