Gene EcHS_A3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3114 
SymbolrdgB 
ID5593948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3125599 
End bp3126192 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content55% 
IMG OID640922233 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001459733 
Protein GI157162415 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG TTGTCCTCGC AACCGGCAAT GCCGGTAAAG TGCGTGAGCT GGCGTCGCTG 
CTTAGCGACT TCGGTCTTGA TATCGTGGCC CAAACAGACC TCGGCGTAGA TTCCGCTGAA
GAAACCGGCC TGACCTTTAT CGAAAACGCG ATTCTGAAAG CGCGCCATGC GGCAAAAGTG
ACCGGTTTAC CGGCAATTGC CGACGACTCT GGTCTGGCGG TAGATGCGCT GGGTGGCGCG
CCGGGTATTT ACTCCGCGCG TTATTCCGGT GAAGACGCGA CCGATCAAAA GAATCTGCAA
AAACTGTTGG AAACACTGAA AGACGTACCG GACGACCAAC GTCAGGCGCG TTTCCACTGC
GTGCTGGTAT ATCTGCGTCA CGCGGAAGAT CCGACTCCGC TGGTGTGCCA CGGTAGCTGG
CCGGGCGTGA TTACTCGTGA ACCAGCGGGC ACTGGTGGCT TTGGTTATGA TCCAATCTTC
TTCGTACCTT CCGAAGGGAA AACCGCTGCC GAACTGACCC GCGAAGAAAA GAGCGCCATT
TCCCACCGTG GTCAGGCATT GAAACTGCTG TTGGACGCTT TACGTAATGG TTAA
 
Protein sequence
MQKVVLATGN AGKVRELASL LSDFGLDIVA QTDLGVDSAE ETGLTFIENA ILKARHAAKV 
TGLPAIADDS GLAVDALGGA PGIYSARYSG EDATDQKNLQ KLLETLKDVP DDQRQARFHC
VLVYLRHAED PTPLVCHGSW PGVITREPAG TGGFGYDPIF FVPSEGKTAA ELTREEKSAI
SHRGQALKLL LDALRNG