Gene EcHS_A3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3112 
Symbol 
ID5593378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp3124738 
End bp3125304 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID640922231 
ProductYGGT family protein 
Protein accessionYP_001459731 
Protein GI157162413 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGT TGACTTTCCT GCTTTCAACG GTCATTGAGC TGTATACCAT GGTGCTGTTA 
TTACGCATCT GGATGCAGTG GGCTCATTGT GATTTTTACA ACCCCTTCTC ACAGTTTGTA 
GTGAAGGTAA CGCAGCCAAT TATCGGGCCA CTGCGCCGCG TTATTCCGGC AATGGGTCCC 
ATTGACAGCG CCTCGCTGCT GGTTGCCTAT ATTCTCAGTT TTATCAAAGC CATTGTGCTG 
TTTAAAGTGG TGACCTTCCT GCCAATCATC TGGATTGCCG GTTTACTGAT TCTGCTGAAA 
ACCATCGGCT TGCTGATTTT CTGGGTCCTG CTGGTGATGG CGATTATGAG CTGGGTAAGC 
CAGGGTCGTA GTCCGATTGA ATACGTGCTG ATTCAGCTGG CCGATCCGCT GCTGCGCCCG 
ATTCGCCGCC TGCTACCGGC AATGGGTGGG ATTGATTTCT CGCCGATGAT CCTCGTTCTG 
CTGCTGTATG TCATCAATAT GGGTGTCGCA GAAGTATTAC AGGCAACCGG AAACATGCTG 
CTGCCGGGGC TGTGGATGGC GTTATGA
 
Protein sequence
MNTLTFLLST VIELYTMVLL LRIWMQWAHC DFYNPFSQFV VKVTQPIIGP LRRVIPAMGP 
IDSASLLVAY ILSFIKAIVL FKVVTFLPII WIAGLLILLK TIGLLIFWVL LVMAIMSWVS 
QGRSPIEYVL IQLADPLLRP IRRLLPAMGG IDFSPMILVL LLYVINMGVA EVLQATGNML 
LPGLWMAL